Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monascus_20ruber_20[genbank_20GCA_5F900184055.1_202017-07-07] 287 sequences; 24,908,785 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq117 100 3e-16 >seq117 Length=965375 Score = 100 bits (110), Expect = 3e-16 Identities = 161/229 (70%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 119642 CTTGTACTCGCCCACACGTTTTTCaaaaaaaTTAGTCTTGCCCTCAAGAGATATGTTATT 119701 || ||| ||||| || || || || || || || || || || | || || ||||| | Sbjct 187909 CTGGTAGTCGCCAACGCGCTTCTCGAAGAAGTTGGTTTTACCAGCCAGGGAGATGTTGTC 187968 Query 119702 CATAAACTCGAAAGGATTTGCAGTGTTGAAATGCTTGTCGTAGCCCAACTCGAACAACAG 119761 ||| || ||||| || || | | |||| | | |||| || ||| | | | | || || Sbjct 187969 CATGAAGTCGAATGGGTTGGTGGAGTTGTAGTACTTGCTGTTGCCAAGCGCAACCAGGAG 188028 Query 119762 TCGATCTGCCACAAACTCGATGTATTCGCACAT-GGATTGCGAATTCATGCCCAACATAG 119820 || ||| || ||||||||||| || | |||||| ||||| ||||||||||| | | | Sbjct 188029 TCTATCAGCAACAAACTCGATATACTGGCACATAAGATTG-GAATTCATGCCGAGAAGGG 188087 Query 119821 CGACCGGTAAAGCATTGGTAAAGAAATCCTTTTCAATGTCGACCGCTTC 119869 | || || | |||| || | ||| ||||| ||||| |||| ||||| Sbjct 188088 CAACTGGGAGGGCATCCGTTAGGAATTCCTTCTCAATTGCGACAGCTTC 188136 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478660682798640