Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monascus_20ruber_20[genbank_20GCA_5F900184055.1_202017-07-07] 287 sequences; 24,908,785 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq219 84.2 3e-11 >seq219 Length=270999 Score = 84.2 bits (92), Expect = 3e-11 Identities = 158/230 (69%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 203833 CTTCGTCTTGTCCACCGTGAACTGAATGGCGTTCACG-GCAGGCCTGCTTCTCAGATAGT 203891 |||| || |||||||||||| ||||| | || || || | | || ||| ||||||| Sbjct 155409 CTTCTCCTGGTCCACCGTGAATTGAATCG-GTGCAGAAGCTGCCATGGTTCGGAGATAGT 155351 Query 203892 ACATGCCGGTCTTTAGGCCCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCA 203951 ||||||| ||||| | ||| ||| |||||| | ||||||| | | |||| || Sbjct 155350 ACATGCCAGTCTTCAATCCCATCTTCCACCCAGCAAAGTGCATGCTGGTAATCTTGCCCA 155291 Query 203952 CGTTGGGGTCGGCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCCCGAT 204011 | | || || |||||| || || || ||||| ||||| ||| | | | || | Sbjct 155290 TGGTAGGCTCCTTCATGTGGATATTGAGCGACTGAGACTGGTCAATGTATGCACCACGGT 155231 Query 204012 CTGCGGCCATATTGATAATGGTCTTCTGCGAAATCTCCCACACCGTCTTG 204061 |||| ||||| | | ||| | ||| || |||||||| || |||||| Sbjct 155230 CTGCAGCCATCTGCAGGATGTTACGCTGAGAGATCTCCCAGACAGTCTTG 155181 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795152347380720