Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monascus_20ruber_20[genbank_20GCA_5F900184055.1_202017-07-07] 287 sequences; 24,908,785 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq221 82.4 9e-11 >seq221 Length=103995 Score = 82.4 bits (90), Expect = 9e-11 Identities = 230/348 (66%), Gaps = 14/348 (4%) Strand=Plus/Minus Query 169173 TTTAGGATGAGACCCTTGATGTGAGAACCATCATTATCGGCATCTGTCATAATCATAAGA 169232 |||| | ||||||||| |||||| ||||| | ||| ||| ||||||||||| | Sbjct 59500 TTTATAAGGAGACCCTTAATGTGACTTCCATCGTGATCCTGATCGGTCATAATCATCAAG 59441 Query 169233 CGACCATAGCGAAGTTCAGAAACATCTTGGTAGTCTT--TTCCT-TGTTGAAGACCCAAG 169289 ||||||| || || | ||| |||| | || ||| | ||||||||||| | Sbjct 59440 TGACCATATCGGAGGCCGCGCGTATC--GGTA-TATTCCTTCTTATGTTGAAGACCAAGA 59384 Query 169290 ATCTTCTTGAGATCGTTGAACTCTTGGTTTGATGTGAGCTGTGCCACTGAAGCGTCGCGG 169349 | ||||||| || | || |||||| ||| | | |||| | || || || ||| Sbjct 59383 AAGTTCTTGATATTCTGGATCTCTTGATTTTGCGATATCTGTTGAAACGAGGCATCACGG 59324 Query 169350 ACATTCTTACACTTCCCACGGAGAGGAAAGACGCCATAGTGATCACGTCCAACGACGGAG 169409 ||||| | ||| || || || || ||||| ||| | |||| |||| || || | Sbjct 59323 ACATTGAGAAGCTTTCCTCGCAGGGGGAAGACACCAAACAGATCCGGTCCGACAACTGCT 59264 Query 169410 AGACCCGCGACCGCAAGGGTTTTCGCTGAATCACCCTCCGTGACAATGAGGGTACACT-- 169467 | || || | || | | ||| ||||||||||| || || | ||| || || || | Sbjct 59263 CGTCCTGCCATGGCCAAGCCTTTAGCTGAATCACCTTCGGTAAGAATCAGTGTGCAGTGA 59204 Query 169468 --TTCCAGATTGCGCCGTACCCGCCTTGTTTGCGTCGTCCAACTTGGG 169513 | || ||| || || ||||||||||| ||| || |||||| Sbjct 59203 TGTCCCTCCTTG----GTTCCTGCCTTGTTTGCATCGGTCAGCTTGGG 59160 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589978683443880