Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monascus_20ruber_20[genbank_20GCA_5F900184055.1_202017-07-07] 287 sequences; 24,908,785 total letters Query= NC_018874.1 Length=211518 Score E Sequences producing significant alignments: (Bits) Value seq91 87.8 2e-12 >seq91 Length=644249 Score = 87.8 bits (96), Expect = 2e-12 Identities = 137/196 (70%), Gaps = 0/196 (0%) Strand=Plus/Plus Query 197455 TCAAAAGCAAAGACGCACACCTGGACGGTTATCTCTTCTTCCTTGACATCTTTACGTTTT 197514 ||||||||||| || || || | ||| | || |||||| |||| |||||||| |||||| Sbjct 483339 TCAAAAGCAAACACACAGACTTTGACCTTAATGTCTTCTGCCTTCACATCTTTCCGTTTT 483398 Query 197515 CTGGTCGCCAGCTTTTGAAAGGGAAGGATCTGCTTCTTCTCAACGTCCCAAGCAACTGCC 197574 || ||| |||| || || || |||| || ||| || | ||||||||||| || | | Sbjct 483399 CTAGTCATAAGCTGCTGGAATGGCAGGACCTTCTTGTTGGCCACGTCCCAAGCGACCGTC 483458 Query 197575 TCAGCGTCCAAGATGAAAGACTTCACTCCCTCGTTGATCGATTGGGGAAGCCTATTGATT 197634 ||| ||| | | ||| || || | || |||||| | | | | || | Sbjct 483459 TCACAGTCTAGAACGAAGCTTTTAACATCGTCTTTGATCCAGTTCTCTAACTTAGCCAGA 483518 Query 197635 ATGTCGGGGTACTTCT 197650 |||||||||||||||| Sbjct 483519 ATGTCGGGGTACTTCT 483534 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 676727172232560