Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monascus_20ruber_20[genbank_20GCA_5F900184055.1_202017-07-07] 287 sequences; 24,908,785 total letters Query= NC_020842.1 Length=79114 Score E Sequences producing significant alignments: (Bits) Value seq219 104 1e-17 >seq219 Length=270999 Score = 104 bits (114), Expect = 1e-17 Identities = 187/271 (69%), Gaps = 2/271 (1%) Strand=Plus/Minus Query 25888 ATTTGGACAGAATAAATG-CCAATCAGCATTTTGCTCAACTTTCTCCATAAATAAATCTG 25946 ||| || ||||| || || ||| ||| | || |||||| || |||||| | ||||| Sbjct 154145 ATTCGGGCAGAA-AAGTGTCCAGTCACCGTTAGCCTCAACCCGCTTCATAAACAGATCTG 154087 Query 25947 GAATCCACATTGCATAAAATAAATCTCTCGCTCTCATTTCTTCTTTTCCGTGATTCTTTT 26006 | |||| | || || || | || | ||||| | || || ||||| || || || Sbjct 154086 GGGTCCAAAGAGCGTAGAAAAGGTCACGAGCTCTGACCTCCTCCTTTCCATGGTTTTTGC 154027 Query 26007 TTAGATCTAAGAAATCAAAAATATCTGAGTGCCATGGTTCTAAATAGATAGCAAAACTAC 26066 ||||| ||||| || |||| ||| | |||||| ||||| | |||||||||||| || Sbjct 154026 GGAGATCCAAGAATTCGAAAACATCAGCGTGCCAAGGTTCCAGGTAGATAGCAAAAGCAC 153967 Query 26067 CTTTTCTTTTTCCTCCACCTTGATCTACGTATCTTGCAGTTTCATTGAAAACTTTCAACA 26126 | | || |||||| ||||| |||||||| ||||| | ||||| || | || Sbjct 153966 CCGGCCGCTTGTTTCCACCCTGATCCACGTATCTCGCAGTATTGTTGAATACACGGAGCA 153907 Query 26127 TTGGAACTAATCCAGTTGAAAATCCGTTTGT 26157 | || || | |||| | ||| | ||||| || Sbjct 153906 TAGGGACGATTCCATTAGAAGAGCCGTTGGT 153876 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 253039114913525