Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monascus_20ruber_20[genbank_20GCA_5F900184055.1_202017-07-07] 287 sequences; 24,908,785 total letters Query= NC_021246.1 Length=281182 Score E Sequences producing significant alignments: (Bits) Value seq89 87.8 3e-12 >seq89 Length=200026 Score = 87.8 bits (96), Expect = 3e-12 Identities = 149/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 193146 CGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGATAACGTTCTAGAA 193205 ||||| || || || | || |||||| || || ||||| || | || | | | Sbjct 22930 CGAAGGACGAGGTGAAGGGTGCTCTCTTTCTGGATGTTGTAGTCAGACAGAGTACGACCA 22989 Query 193206 TCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTA 193265 || || | || ||||| || ||||| | | ||| ||||| ||||| |||||||| || Sbjct 22990 TCCTCAAGCTGCTTTCCCGCGAAAATGAGACGCTGCTGATCTGGAGGAATTCCTTCCTTG 23049 Query 193266 TCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATA 193325 || || || || || || | || ||||||||||||||| || || || || || || Sbjct 23050 TCCTGGATCTTTGTCTTCACGTTATCAATAGTATCGGAAGATTCTACCTCGAGTGTGATG 23109 Query 193326 GTTTTACCTGTTAGCGTTTTTACAAATATTTGCATT 193361 || || || || || || || || || || |||||| Sbjct 23110 GTCTTTCCCGTAAGGGTCTTCACGAAGATCTGCATT 23145 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 899651172489840