Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monascus_20ruber_20[genbank_20GCA_5F900184055.1_202017-07-07] 287 sequences; 24,908,785 total letters Query= NC_023177.1 Length=124688 Score E Sequences producing significant alignments: (Bits) Value seq89 82.4 6e-11 >seq89 Length=200026 Score = 82.4 bits (90), Expect = 6e-11 Identities = 129/185 (70%), Gaps = 0/185 (0%) Strand=Plus/Minus Query 107568 GTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGCGATACTGTCGGC 107627 ||||| || | || ||||| || || ||| |||| ||| || |||| ||| ||| | Sbjct 23588 GTCAAGACCCTCACTGGCAAGACTATCACCCTCGAGGTTGAGTCTAGCGACACTATCGAC 23529 Query 107628 CAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAGCAGAGACTTATT 107687 | || || |||||| ||||| || || | ||| ||| |||||| | | || Sbjct 23528 AATGTCAAGACAAAGATCCAGGATAAGGAGGGTATTCCCCCGGACCAGCAGCGTTTGATC 23469 Query 107688 TATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAACATTCAAAAGGAG 107747 | || ||||| ||||| ||||||| | || || | |||||||||||||| |||||| Sbjct 23468 TTCGCTGGTAAGCAGCTTGAGGACGGCCGCACCCTGTCCGACTACAACATTCAGAAGGAG 23409 Query 107748 TCTAC 107752 || || Sbjct 23408 TCCAC 23404 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 398875404803743