Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monascus_20ruber_20[genbank_20GCA_5F900184055.1_202017-07-07] 287 sequences; 24,908,785 total letters Query= NC_023423.1 Length=610033 Score E Sequences producing significant alignments: (Bits) Value seq114 84.2 9e-11 >seq114 Length=402525 Score = 84.2 bits (92), Expect = 9e-11 Identities = 120/167 (72%), Gaps = 13/167 (8%) Strand=Plus/Minus Query 309684 CTCCATCAACTTGGCGATAGTCATACGAGAAGGAATGGCAAGAGGGTTGATGAGAATGTC 309743 ||| ||||| | || || |||||||| || |||||||| | |||||||||| | ||| Sbjct 166366 CTCAATCAAGTGAGCAATGGTCATACGTGACGGAATGGCGTGTGGGTTGATGATCAAGTC 166307 Query 309744 AGGTCTCAT----TCCGGTGATTGGGTTGAAAGGCATATCTTCTT-CAGGTACAATCAAA 309798 || ||| ||| ||| | || |||||||| || | | ||||| | | | Sbjct 166306 GGGAGTCAGACCCTCCCGTG-------TAAAGGGCATATCCTCCTGCCGGTACG-TGATA 166255 Query 309799 CCAATAGTTCCCTTTTGAGCGTGCCTGGAAGCAAACTTGTCACCAAT 309845 |||||||| ||||| || |||| | |||||| |||||||||||||| Sbjct 166254 CCAATAGTACCCTTCTGCCCGTGACGGGAAGCGAACTTGTCACCAAT 166208 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1951967222224136