Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monascus_20ruber_20[genbank_20GCA_5F900184055.1_202017-07-07] 287 sequences; 24,908,785 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq91 84.2 2e-11 seq219 82.4 7e-11 >seq91 Length=644249 Score = 84.2 bits (92), Expect = 2e-11 Identities = 126/179 (70%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 131936 TTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAATAGATT 131995 || || |||||||||||||||| ||||| ||| |||||||| ||||| | | |||| Sbjct 240257 TTCTGGATGTTGTAGTCGCTCAGAGTACGGCCATCCTCGAGCTGCTTACCAGCAAAGATA 240198 Query 131996 AGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAACTGTTCC 132055 |||||||| || || || || ||||| || || || || ||| || | | || Sbjct 240197 AGACGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTTGTCTTGACGTTGTCG 240138 Query 132056 ACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTATGAA 132114 | || ||| ||| ||| || |||| || | || ||||| ||||| || || | ||| Sbjct 240137 ATGGTGTCGCTCGACTCGACGTCGAGGGTAATAGTCTTACCCGTCAGGGTCTTCACGAA 240079 >seq219 Length=270999 Score = 82.4 bits (90), Expect = 7e-11 Identities = 140/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 148204 GCGTGCGTAAACAATTTTTGACTCATCATGCGATACGTCTCAATAGCGTCTTCGATGTCG 148263 || || ||||| | || ||| ||||| | ||| |||||||| || ||| || ||| Sbjct 153685 GCATGGGTAAAGTACTTCTGAGACATCAAGTTATATGTCTCAATGGCCCTTTCAATATCG 153626 Query 148264 TCGCCGTGAATGCCCAGCGCGACGCGCATGAGCATGTGCTGTGGTCGTTCGGCAACTTGA 148323 | |||||| || || | || || ||||| ||||||||||| || || || || || | Sbjct 153625 TTGCCGTGTATTCCAACAGCAACCCGCATCAGCATGTGCTGGGGACGCTCTGCCACCTTC 153566 Query 148324 TTGTTGATCTTGAGAAGATATCCATTTTCGAGGGTTTTGTAACCAAAGTACTTGTAATCA 148383 |||||| || || ||| | || || || ||| |||| ||| | ||||| | | Sbjct 153565 CCATTGATCCGTAGCAGGTATGAACGCTCAAGAGTCTTGAAACCGAAGAAATTGTAGTTA 153506 Query 148384 AAATCTAGCTCGTAAGCGATGGC 148406 ||||| | ||||| |||| || Sbjct 153505 AAATCGCGATCGTACACGATTGC 153483 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476609490157320