Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monascus_20ruber_20[genbank_20GCA_5F900184055.1_202017-07-07] 287 sequences; 24,908,785 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq117 100 2e-16 >seq117 Length=965375 Score = 100 bits (110), Expect = 2e-16 Identities = 117/158 (74%), Gaps = 0/158 (0%) Strand=Plus/Minus Query 44129 CGACTTGTCGCGTTTGCAGTTGTGGAAGGCATTTTCTTTTCAGGATCGTTTGCGGCCATA 44188 || |||||||| || || | ||| |||||||| ||||| || ||||| ||||| |||| Sbjct 188349 CGTCTTGTCGCCTTCGCCGCTGTTGAAGGCATCTTCTTCTCTGGATCCTTTGCATCCATC 188290 Query 44189 TTTTGGTTAAAGAAACGAGGTTTGATGCCTGGGTTGACGTTTTCAAATGAGTTAATAAGT 44248 || ||||| ||||| || || ||||||||||| | || || || || ||| | || | Sbjct 188289 TTCTGGTTGAAGAAGCGTGGCTTGATGCCTGGTCTTACTTTCTCCAACGAGCTGATTTCT 188230 Query 44249 CGTGATGAAGGCTTACATTGCGATTTTGCTTGCTTGTT 44286 || |||||||| | || || || |||||| |||| Sbjct 188229 CGCGATGAAGGTCTTCACACGGACTTCGCTTGCCTGTT 188192 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397454609773435