Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monascus_20ruber_20[genbank_20GCA_5F900184055.1_202017-07-07] 287 sequences; 24,908,785 total letters Query= NC_029996.1 Length=134272 Score E Sequences producing significant alignments: (Bits) Value seq91 93.3 4e-14 >seq91 Length=644249 Score = 93.3 bits (102), Expect = 4e-14 Identities = 133/182 (73%), Gaps = 4/182 (2%) Strand=Plus/Minus Query 39097 TTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAATATA 39156 || || || || || ||| || || || | || || ||||| || || ||||| ||| Sbjct 240257 TTCTGGATGTTGTAGTCGCTCAGAGTACGGCCATCCTCGAGCTGCTTACCAGCAAAGATA 240198 Query 39157 AGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTCTGT-TTGAGCGTCGC 39215 |||||||||||||| | ||| | || ||| |||||| ||| || ||| |||| ||| | Sbjct 240197 AGACGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTT-TGTCTTGA-CGTTGT 240140 Query 39216 C-ACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAACAA 39274 | | || ||||||||||| ||||| | || ||| | || |||||||| || || || | Sbjct 240139 CGATGGTGTCGCTCGACTCGACGTCGAGGGTAATAGTCTTACCCGTCAGGGTCTTCACGA 240080 Query 39275 AG 39276 || Sbjct 240079 AG 240078 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429544097530031