Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Monascus_20ruber_20[genbank_20GCA_5F900184055.1_202017-07-07]
287 sequences; 24,908,785 total letters
Query= NC_030842.1
Length=115510
Score E
Sequences producing significant alignments: (Bits) Value
seq114 93.3 3e-14
>seq114
Length=402525
Score = 93.3 bits (102), Expect = 3e-14
Identities = 144/197 (73%), Gaps = 8/197 (4%)
Strand=Plus/Plus
Query 48495 TGACGGCAAGAAGCTCGTCAAGGTGAGGCTGAGGACCCCCAGGCACCCAGAGATGGGTGA 48554
||||| | |||| |||||||||| || ||||||| | | | ||| |||| |||||
Sbjct 166156 TGACGACCTGAAGTTCGTCAAGGTCCGGATGAGGACTACGAAGATTCCACAGATTGGTGA 166215
Query 48555 CAAGTTTGCGTCCT-TCACGGCGCAAAAGGGGACATGTGG-AGC-CGTCCTGACCCAGGA 48611
|||||| || ||| |||||| ||| ||||| || ||| | | ||| | | | ||||
Sbjct 166216 CAAGTTCGCTTCCCGTCACGG-GCAGAAGGGTACTATTGGTATCACGTACCGGC--AGGA 166272
Query 48612 GGACATGCCCTTCGACAAGGACGGGG-TGGTGCCCGACCTCATCATCAACCCCCACGCCT 48670
||| |||||||| ||| || ||| || |||||| | ||||||||||| ||||||
Sbjct 166273 GGATATGCCCTTT-ACACGGGAGGGTCTGACTCCCGACTTGATCATCAACCCACACGCCA 166331
Query 48671 TTCCCTCCAGGATGACC 48687
|||| || | ||||||
Sbjct 166332 TTCCGTCACGTATGACC 166348
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 369505907533097
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |