Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Monilinia_20aucupariae_20[genbank_20GCA_5F002162555.1_202017-05-31]
505 sequences; 54,948,206 total letters
Query= NC_001132.2
Length=161773
Score E
Sequences producing significant alignments: (Bits) Value
seq3 143 3e-29
>seq3
Length=2715537
Score = 143 bits (158), Expect = 3e-29
Identities = 346/514 (67%), Gaps = 10/514 (2%)
Strand=Plus/Plus
Query 16674 TTTGGTAATCGCTAACGCGTTTTTCGAAAAAGTTAGTTTTGCCCTCTAGAGATATATTCT 16733
|||||||||| | ||| | || ||||||||||| |||||||| | | || || ||||
Sbjct 2405377 TTTGGTAATCACCAACTCTCTTCTCGAAAAAGTTGGTTTTGCCGGCCAATGAGATGTTCT 2405436
Query 16734 CCATGAAATCAAAAGGATTAGTAG--CTGAAAATATTTTAGAGTACCCCAGTTCGGCGAT 16791
|||||||||| || || || | || ||| || | ||| || |||| || ||
Sbjct 2405437 CCATGAAATCGAATGGGTTGGCAGACCTGTAA--AATTTCTCGTTGCCCAAAGCGATGAG 2405494
Query 16792 TAATCTATCCGCTACAAATTCTATATATTGGCACATTA-ATTCGCAGTTCATTCCTATAA 16850
| | ||| || || || || || ||||| ||| | |||||| |||||| |||| |
Sbjct 2405495 AAGACGATCAGCAACGAACTCGATGTATTGCTTCATGAGATTCGC-GTTCATGCCTAAGA 2405553
Query 16851 GACGTAC-CGGAAGAGCTTCCGTCAAAAATCGTTGCTCTATAACAACCGCTTCCTTAATA 16909
|| | || |||||||| || ||||| ||| |||||| || | || ||||| | ||
Sbjct 2405554 GA-GCACATGGAAGAGCCTCGGTCAAGAATTCTTGCTCGATTTCGACGGCTTCAGTGATG 2405612
Query 16910 ATA-CTAGCAACTCGTTCCTCGGACGGTGTATGTTTAAGATGTTTAAACATCAGACATGC 16968
| | || | ||| || || ||| || || || ||||| ||| | || |||||
Sbjct 2405613 ACATCTTG-AACGGCTTGCTTGGATGGGCGGTGCTTGAGATGGGAAAAGAGGAGGCATGC 2405671
Query 16969 GAAATCGCAATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTCAACCCGGG 17028
||| ||| || | || ||||| | | ||| |||||||| || || || | ||||
Sbjct 2405672 GAAGTCGGTGTGGAGACCTTCGTCACGGGAGATGAGTTCGTTGGAGAAAGTAAGTCCGGC 2405731
Query 17029 CATCTTTCCTCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCAGAAAAGAATATACC 17088
||| || || ||||| | ||| || || | ||||| || || || ||||| |||||
Sbjct 2405732 CATGAGACCACGCTTCTTGAGCCAGAAGATAGATGCGAAGGATCCGGAGAAGAAAATACC 2405791
Query 17089 CTCGACGGATGCAAACGCGATTAATCGTTCGGCGTACGTCGCGTCTTTGTTACGAATCCA 17148
|| |||| || || |||| | |||| || | || | || |||| |||||||
Sbjct 2405792 TTCAACGGCAGCGAATGCGACGAGACGTTGAGCAAAGGTAGAGTTCTTGTCTTGAATCCA 2405851
Query 17149 TTTCTGCACCCACTCGGCTTTTTGCTTTATGCAA 17182
|| |||| ||||| || | || ||||||
Sbjct 2405852 CTTGACAGCCCAGTCGGCCTTCTTTTTAATGCAA 2405885
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 517542332993400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |