Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Monilinia_20aucupariae_20[genbank_20GCA_5F002162555.1_202017-05-31]
505 sequences; 54,948,206 total letters
Query= NC_001973.1
Length=161046
Score E
Sequences producing significant alignments: (Bits) Value
seq17 118 1e-21
seq3 118 1e-21
seq27 93.3 4e-14
seq1 84.2 2e-11
>seq17
Length=1064257
Score = 118 bits (130), Expect = 1e-21
Identities = 155/215 (72%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
||||| || ||||| || || || |||||||||||||||||| |||| || || | |
Sbjct 789551 ATGCAGATCTTCGTCAAGACCCTTACGGGCAAAACCATCACCCTCGAGGTTGAGTCTTCG 789610
Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809
|||| | | | | ||||| || || | ||||| ||||| ||||| | |||||
Sbjct 789611 GACACCATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGAATCCCACCCGACCAA 789670
Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869
|| ||| | |||| ||| || || || || || || | || || || ||||||||||
Sbjct 789671 CAGCGATTGATCTTCGCTGGAAAGCAACTTGAGGATGGCCGTACTCTTTCCGACTACAAC 789730
Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCG 40904
||||| |||||| |||| || || | ||||||||
Sbjct 789731 ATCCAAAAGGAGTCCACCCTTCACTTGGTGTTGCG 789765
>seq3
Length=2715537
Score = 118 bits (130), Expect = 1e-21
Identities = 197/284 (69%), Gaps = 3/284 (1%)
Strand=Plus/Minus
Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTG 116695
|| |||| |||||||| ||||| ||||| || |||||||||| || ||| | || ||
Sbjct 2406282 ATCTGGCAGATGTACAAGAAGGCAGAGGCATCTTTCTGGACCGCAGAAGAGATCGATTTG 2406223
Query 116696 TCCAAGGACACGAGCGACTGGGAGCGCT---TGAACGACAACGAGCGCCATTTCATCAAG 116752
|| ||||| ||||||| | | | || || | |||||| | |||||| |
Sbjct 2406222 TCAAAGGATCTTCACGACTGGAACAACAGACTCAATGATGATGAGCGCTACTTCATCTCG 2406163
Query 116753 CACGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCGT 116812
||||| || || || ||||| || ||||| || ||||| ||||| |||| |||||
Sbjct 2406162 CACGTTCTCGCATTCTTCGCAGCATCTGACGGAATTGTCAATGAGAACTTGGTAGAGCGA 2406103
Query 116813 TTCGCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCATG 116872
||| | || || || | | ||||| | ||||||||||| || || ||| |||
Sbjct 2406102 TTCAGTGGTGAAGTTCAAATCCCAGAGGCAAGATGCTTCTACGGTTTCCAAATCATGATG 2406043
Query 116873 GAGAACGTGCACTCGGAAATGTATTCGACCCTCATCGACACGTA 116916
|||||| | || || |||| || || ||||||||||| ||
Sbjct 2406042 GAGAACATTCATTCTGAAACATACTCTCTTCTCATCGACACATA 2405999
Score = 105 bits (116), Expect = 7e-18
Identities = 220/320 (69%), Gaps = 6/320 (2%)
Strand=Plus/Minus
Query 117038 CGCCTGGTGGCCTTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATA 117097
|| || || || ||||| ||||| || || | ||||| || || ||||| | ||
Sbjct 2405818 CGTCTCGTCGCATTCGCTGCCGTTGAAGGTATTTTCTTCTCCGGATCCTTCGCATCTATC 2405759
Query 117098 TTTTGGCTCAAGAAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCC 117157
|| ||||||||||| || || |||||| |||| || |||||| |||||| |||||||||
Sbjct 2405758 TTCTGGCTCAAGAAGCGTGGTCTCATGGCCGGACTTACTTTCTCCAACGAACTCATCTCC 2405699
Query 117158 AGGGACGAGGGTCTGCATTGCGACTTTGCCTGTTTGCTGTTCAAGCATTTGGTGCAGCGA 117217
| ||||| ||||| || |||||| || || | || || ||| | ||| ||
Sbjct 2405698 CGTGACGAAGGTCTCCACACCGACTTCGCATGCCTCCTCTTTTCCCATCTCAAGCACCG- 2405640
Query 117218 CCGAGCGCGGCGCG-CGTCAGGGAGATCGTCACCGACGCGGTCGCCATCGAGCAGCGCTT 117276
|| | | || | ||| || || |||| || || |||| |||||||| ||
Sbjct 2405639 CCCATCCAAGCAAGCCGTTCAAGATGTCATCACTGAAGCCGTCGAAATCGAGCAAGAATT 2405580
Query 117277 CCTCACCGAAGCGCTGCC-GGTGCGTCTGCTGGGACTCAATTGCGAAAC-GATGTCGCAA 117334
| | ||||| || || || |||| ||| | || | || ||||| | ||| ||||
Sbjct 2405579 CTTGACCGAGGCTCTTCCATGTGC-TCTCTTAGGCATGAA-CGCGAATCTCATGAAGCAA 2405522
Query 117335 TACATCGAGTTCGTCGCCGA 117354
|||||||||||||| || ||
Sbjct 2405521 TACATCGAGTTCGTTGCTGA 2405502
>seq27
Length=788475
Score = 93.3 bits (102), Expect = 4e-14
Identities = 138/193 (72%), Gaps = 2/193 (1%)
Strand=Plus/Plus
Query 40714 ACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTGCA-AACGCTCAAGGA 40772
|| ||||| || |||||| | || |||||| ||| ||| | | | | |||| |||||
Sbjct 515514 ACTGGCAAGACTATCACCCTTGAGGTCGAATCCAGCGATACCATTGACAACG-TCAAGTC 515572
Query 40773 AAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAA 40832
||| || | || || ||||| || ||| | ||||| || || | || | ||| || ||
Sbjct 515573 AAAGATCCAAGATAAGGAGGGAATTCCCCCCGACCAACAGCGTTTGATTTTCGCCGGAAA 515632
Query 40833 ACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCA 40892
|| || || || | |||||| | | ||||||||||| || |||||| | ||||| ||
Sbjct 515633 GCAACTTGAGGATGGTCGCACCTTGAGTGACTACAACATTCAAAAGGAGTCTACGCTCCA 515692
Query 40893 TCTAGTGTTGCGC 40905
||| ||| | |||
Sbjct 515693 TCTTGTGCTCCGC 515705
>seq1
Length=6243313
Score = 84.2 bits (92), Expect = 2e-11
Identities = 127/181 (70%), Gaps = 0/181 (0%)
Strand=Plus/Plus
Query 40699 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTG 40758
||||| || || || |||||||| ||||||||| | || ||||| || | |||| | |
Sbjct 2454596 TTCGTCAAGACCCTTACGGGCAAGACCATCACCCTTGAGGTCGAGTCCTCTGACACCATT 2454655
Query 40759 CAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTC 40818
| | ||||| || || | ||||| ||||| || || | || || ||||| |
Sbjct 2454656 GACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGAATTCCTCCCGATCAACAACGTTTG 2454715
Query 40819 ATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAG 40878
|||| ||| || || || || || |||| || || ||| || ||||||||||| |||
Sbjct 2454716 ATCTTCGCTGGAAAGCAACTTGAGGACGGACGTACTCTCTCAGATTACAACATCCAAAAG 2454775
Query 40879 G 40879
|
Sbjct 2454776 G 2454776
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 515215947678800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |