Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monilinia_20aucupariae_20[genbank_20GCA_5F002162555.1_202017-05-31] 505 sequences; 54,948,206 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq17 118 1e-21 seq3 118 1e-21 seq27 93.3 4e-14 seq1 84.2 2e-11 >seq17 Length=1064257 Score = 118 bits (130), Expect = 1e-21 Identities = 155/215 (72%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || || |||||||||||||||||| |||| || || | | Sbjct 789551 ATGCAGATCTTCGTCAAGACCCTTACGGGCAAAACCATCACCCTCGAGGTTGAGTCTTCG 789610 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | | ||||| || || | ||||| ||||| ||||| | ||||| Sbjct 789611 GACACCATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGAATCCCACCCGACCAA 789670 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || ||| | |||| ||| || || || || || || | || || || |||||||||| Sbjct 789671 CAGCGATTGATCTTCGCTGGAAAGCAACTTGAGGATGGCCGTACTCTTTCCGACTACAAC 789730 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCG 40904 ||||| |||||| |||| || || | |||||||| Sbjct 789731 ATCCAAAAGGAGTCCACCCTTCACTTGGTGTTGCG 789765 >seq3 Length=2715537 Score = 118 bits (130), Expect = 1e-21 Identities = 197/284 (69%), Gaps = 3/284 (1%) Strand=Plus/Minus Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTG 116695 || |||| |||||||| ||||| ||||| || |||||||||| || ||| | || || Sbjct 2406282 ATCTGGCAGATGTACAAGAAGGCAGAGGCATCTTTCTGGACCGCAGAAGAGATCGATTTG 2406223 Query 116696 TCCAAGGACACGAGCGACTGGGAGCGCT---TGAACGACAACGAGCGCCATTTCATCAAG 116752 || ||||| ||||||| | | | || || | |||||| | |||||| | Sbjct 2406222 TCAAAGGATCTTCACGACTGGAACAACAGACTCAATGATGATGAGCGCTACTTCATCTCG 2406163 Query 116753 CACGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCGT 116812 ||||| || || || ||||| || ||||| || ||||| ||||| |||| ||||| Sbjct 2406162 CACGTTCTCGCATTCTTCGCAGCATCTGACGGAATTGTCAATGAGAACTTGGTAGAGCGA 2406103 Query 116813 TTCGCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCATG 116872 ||| | || || || | | ||||| | ||||||||||| || || ||| ||| Sbjct 2406102 TTCAGTGGTGAAGTTCAAATCCCAGAGGCAAGATGCTTCTACGGTTTCCAAATCATGATG 2406043 Query 116873 GAGAACGTGCACTCGGAAATGTATTCGACCCTCATCGACACGTA 116916 |||||| | || || |||| || || ||||||||||| || Sbjct 2406042 GAGAACATTCATTCTGAAACATACTCTCTTCTCATCGACACATA 2405999 Score = 105 bits (116), Expect = 7e-18 Identities = 220/320 (69%), Gaps = 6/320 (2%) Strand=Plus/Minus Query 117038 CGCCTGGTGGCCTTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATA 117097 || || || || ||||| ||||| || || | ||||| || || ||||| | || Sbjct 2405818 CGTCTCGTCGCATTCGCTGCCGTTGAAGGTATTTTCTTCTCCGGATCCTTCGCATCTATC 2405759 Query 117098 TTTTGGCTCAAGAAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCC 117157 || ||||||||||| || || |||||| |||| || |||||| |||||| ||||||||| Sbjct 2405758 TTCTGGCTCAAGAAGCGTGGTCTCATGGCCGGACTTACTTTCTCCAACGAACTCATCTCC 2405699 Query 117158 AGGGACGAGGGTCTGCATTGCGACTTTGCCTGTTTGCTGTTCAAGCATTTGGTGCAGCGA 117217 | ||||| ||||| || |||||| || || | || || ||| | ||| || Sbjct 2405698 CGTGACGAAGGTCTCCACACCGACTTCGCATGCCTCCTCTTTTCCCATCTCAAGCACCG- 2405640 Query 117218 CCGAGCGCGGCGCG-CGTCAGGGAGATCGTCACCGACGCGGTCGCCATCGAGCAGCGCTT 117276 || | | || | ||| || || |||| || || |||| |||||||| || Sbjct 2405639 CCCATCCAAGCAAGCCGTTCAAGATGTCATCACTGAAGCCGTCGAAATCGAGCAAGAATT 2405580 Query 117277 CCTCACCGAAGCGCTGCC-GGTGCGTCTGCTGGGACTCAATTGCGAAAC-GATGTCGCAA 117334 | | ||||| || || || |||| ||| | || | || ||||| | ||| |||| Sbjct 2405579 CTTGACCGAGGCTCTTCCATGTGC-TCTCTTAGGCATGAA-CGCGAATCTCATGAAGCAA 2405522 Query 117335 TACATCGAGTTCGTCGCCGA 117354 |||||||||||||| || || Sbjct 2405521 TACATCGAGTTCGTTGCTGA 2405502 >seq27 Length=788475 Score = 93.3 bits (102), Expect = 4e-14 Identities = 138/193 (72%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 40714 ACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTGCA-AACGCTCAAGGA 40772 || ||||| || |||||| | || |||||| ||| ||| | | | | |||| ||||| Sbjct 515514 ACTGGCAAGACTATCACCCTTGAGGTCGAATCCAGCGATACCATTGACAACG-TCAAGTC 515572 Query 40773 AAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAA 40832 ||| || | || || ||||| || ||| | ||||| || || | || | ||| || || Sbjct 515573 AAAGATCCAAGATAAGGAGGGAATTCCCCCCGACCAACAGCGTTTGATTTTCGCCGGAAA 515632 Query 40833 ACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCA 40892 || || || || | |||||| | | ||||||||||| || |||||| | ||||| || Sbjct 515633 GCAACTTGAGGATGGTCGCACCTTGAGTGACTACAACATTCAAAAGGAGTCTACGCTCCA 515692 Query 40893 TCTAGTGTTGCGC 40905 ||| ||| | ||| Sbjct 515693 TCTTGTGCTCCGC 515705 >seq1 Length=6243313 Score = 84.2 bits (92), Expect = 2e-11 Identities = 127/181 (70%), Gaps = 0/181 (0%) Strand=Plus/Plus Query 40699 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTG 40758 ||||| || || || |||||||| ||||||||| | || ||||| || | |||| | | Sbjct 2454596 TTCGTCAAGACCCTTACGGGCAAGACCATCACCCTTGAGGTCGAGTCCTCTGACACCATT 2454655 Query 40759 CAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTC 40818 | | ||||| || || | ||||| ||||| || || | || || ||||| | Sbjct 2454656 GACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGAATTCCTCCCGATCAACAACGTTTG 2454715 Query 40819 ATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAG 40878 |||| ||| || || || || || |||| || || ||| || ||||||||||| ||| Sbjct 2454716 ATCTTCGCTGGAAAGCAACTTGAGGACGGACGTACTCTCTCAGATTACAACATCCAAAAG 2454775 Query 40879 G 40879 | Sbjct 2454776 G 2454776 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515215947678800