Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monilinia_20aucupariae_20[genbank_20GCA_5F002162555.1_202017-05-31] 505 sequences; 54,948,206 total letters Query= NC_001993.1 Length=236120 Score E Sequences producing significant alignments: (Bits) Value seq27 118 2e-21 seq10 104 4e-17 >seq27 Length=788475 Score = 118 bits (130), Expect = 2e-21 Identities = 164/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 |||||||| || | ||||| | || || || || || ||| | ||| |||| || Sbjct 516001 ATGCAAATCTTCGTTAAGACCTTGACTGGAAAGACCATCACTTTGGAGGTTGAGTCATCG 516060 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 ||||| || ||| | ||| || ||||||||||| || ||||| |||||||||||| Sbjct 516061 GATACGATCGACAATGTCAAATCTAAGATTCAAGATAAGGAGGGTATTCCACCTGATCAA 516120 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 || | ||||| ||||| || || || | || ||| | || || || ||| || || Sbjct 516121 CAGCGTCTTATCTTTGCTGGTAAGCAGCTTGAAGATGGCCGCACGTTGTCAGACTACAAC 516180 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 || ||||| ||||| || || |||||||| | ||| | || |||||||| Sbjct 516181 ATCCAAAAGGAATCTACCTTACATTTGGTCCTTCGTCTCCGTGGTGGTAT 516230 Score = 87.8 bits (96), Expect = 3e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 |||||||| ||| | ||||| | || || || || || || |||| | ||| | Sbjct 516229 ATGCAAATCTTTGTCAAGACCTTGACTGGTAAGACAATTACGTTAGAAGTAGAATCGTCA 516288 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 ||||| ||| ||| | || ||| || || || || || ||||| |||||||| ||| Sbjct 516289 GATACTATTGATAACGTCAAGTCGAAGATCCAGGACAAGGAGGGTATTCCACCTGACCAA 516348 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 ||| | | || ||||||||||| || || ||||| | |||| | ||||| || Sbjct 516349 CAACGATTGATCTTTGCAGGAAAGCAGTTGGAGGACGGCAGAACCCTTTCCGATTACAAC 516408 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGT 124766 |||||||| || || |||| ||||| | ||| | || |||||| Sbjct 516409 ATTCAAAAGGAGAGCACCCTGCACTTGGTGCTCCGTCTTCGTGGTGGT 516456 >seq10 Length=1606734 Score = 104 bits (114), Expect = 4e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 205561 ACATGAAATTGTACAAAACAATGACAAGGTGGTATAACCATATTTTCAACATCTATAGGA 205620 |||| |||||| |||| ||||||||| |||| | |||| | || ||| | Sbjct 1402589 ACATAAAATTGAGCAAACATATGACAAGGCGGTAGAGCCATCAACTTAATATCCGCCACA 1402530 Query 205621 TTCCAGGCTGTTAATATTATATTTCTAGATTCAGGtttattttttattttatttatAATA 205680 ||||| || ||| || || | || ||| ||||| |||| ||| | ||| Sbjct 1402529 TTCCACGCACTTAGGATGATCCTCCTGTCCCAAGGATTATTCTTTAATTTCCACACAATT 1402470 Query 205681 TGTGTTAATTGATCAAATCCTTGATTTGTATAATTTGTATCCATATCAATATATTTAGCA 205740 | | || ||||||| || || |||||||| || || |||||||||||||||| Sbjct 1402469 TCCGACAACTGATCAACGCCCTGGCCTGTATAATCCGTCTCGGCATCAATATATTTAGCA 1402410 Query 205741 CCAAAATGACGCCATTGAAAACCATAAACTGGACCTAAATCACCTTC 205787 |||||||| ||||||||||| ||||| || |||||||| || ||||| Sbjct 1402409 CCAAAATGGCGCCATTGAAATCCATATACGGGACCTAAGTCTCCTTC 1402363 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 755451231184000