Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Monilinia_20aucupariae_20[genbank_20GCA_5F002162555.1_202017-05-31]
505 sequences; 54,948,206 total letters
Query= NC_002169.1
Length=135611
Score E
Sequences producing significant alignments: (Bits) Value
seq17 131 1e-25
seq27 102 7e-17
seq1 89.7 4e-13
>seq17
Length=1064257
Score = 131 bits (144), Expect = 1e-25
Identities = 159/217 (73%), Gaps = 0/217 (0%)
Strand=Plus/Minus
Query 118526 CAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATC 118585
|||||||||||| | || ||||| ||||| |||||||| ||| | ||| || |||
Sbjct 789763 CAACACCAAGTGAAGGGTGGACTCCTTTTGGATGTTGTAGTCGGAAAGAGTACGGCCATC 789704
Query 118586 CTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTC 118645
||| || || ||||||||| |||| | ||||| || ||||| || || |||||||||||
Sbjct 789703 CTCAAGTTGCTTTCCAGCGAAGATCAATCGCTGTTGGTCGGGTGGGATTCCCTCCTTGTC 789644
Query 118646 TGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGT 118705
|| || || || | |||| |||||||| ||| ||||||| ||| | ||
Sbjct 789643 CTGGATCTTGGACTTGACATTGTCGATGGTGTCCGAAGACTCAACCTCGAGGGTGATGGT 789584
Query 118706 TTTGCCGGTCAGAGTTTTTACAAAAATCTGCATGGCT 118742
|||||| || || || || || || ||||||||| ||
Sbjct 789583 TTTGCCCGTAAGGGTCTTGACGAAGATCTGCATGACT 789547
>seq27
Length=788475
Score = 102 bits (112), Expect = 7e-17
Identities = 135/186 (73%), Gaps = 1/186 (1%)
Strand=Plus/Minus
Query 118532 CAAG-TGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGA 118590
|||| |||| |||||||| |||||||||||||| || |||| ||||| |||||| |
Sbjct 515697 CAAGATGGAGCGTAGACTCCTTTTGAATGTTGTAGTCACTCAAGGTGCGACCATCCTCAA 515638
Query 118591 GCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAA 118650
| || ||||| ||| | || | |||||| || ||||| || || |||||||| ||| |
Sbjct 515637 GTTGCTTTCCGGCGAAAATCAAACGCTGTTGGTCGGGGGGAATTCCCTCCTTATCTTGGA 515578
Query 118651 TTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGC 118710
| ||| || || | || | ||| || || |||||||| | ||| | || ||||
Sbjct 515577 TCTTTGACTTGACGTTGTCAATGGTATCGCTGGATTCGACCTCAAGGGTGATAGTCTTGC 515518
Query 118711 CGGTCA 118716
| ||||
Sbjct 515517 CAGTCA 515512
>seq1
Length=6243313
Score = 89.7 bits (98), Expect = 4e-13
Identities = 127/179 (71%), Gaps = 0/179 (0%)
Strand=Plus/Minus
Query 118551 TTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATG 118610
||||| ||||||||||| | ||| || ||||| || || ||||||||| ||||
Sbjct 2454774 TTTTGGATGTTGTAATCTGAGAGAGTACGTCCGTCCTCAAGTTGCTTTCCAGCGAAGATC 2454715
Query 118611 AGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCG 118670
| ||| || ||||||||||| || ||||||||||| || || || || | ||
Sbjct 2454714 AAACGTTGTTGATCGGGAGGAATTCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCA 2454655
Query 118671 ACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAA 118729
| |||||| | | ||||||||| | ||| | || ||||| || || || || || ||
Sbjct 2454654 ATGGTGTCAGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTAAGGGTCTTGACGAA 2454596
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 433827729909460
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |