Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monilinia_20aucupariae_20[genbank_20GCA_5F002162555.1_202017-05-31] 505 sequences; 54,948,206 total letters Query= NC_002331.1 Length=178733 Score E Sequences producing significant alignments: (Bits) Value seq17 123 3e-23 seq27 107 2e-18 >seq17 Length=1064257 Score = 123 bits (136), Expect = 3e-23 Identities = 157/216 (73%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 42968 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 43027 |||||||||||| || | ||| ||||||||| || ||||| || | ||||| || | Sbjct 789766 ACGCAACACCAAGTGAAGGGTGGACTCCTTTTGGATGTTGTAGTCGGAAAGAGTACGGCC 789707 Query 43028 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTT 43087 || || || ||||| |||||||| || | |||||| ||||||| || | | |||||| Sbjct 789706 ATCCTCAAGTTGCTTTCCAGCGAAGATCAATCGCTGTTGGTCGGGTGGGATTCCCTCCTT 789647 Query 43088 GTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGAT 43147 |||| ||| || |||| | | | ||||| || || || |||| ||||| Sbjct 789646 GTCCTGGATCTTGGACTTGACATTGTCGATGGTGTCCGAAGACTCAACCTCGAGGGTGAT 789587 Query 43148 GGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 |||||||||||| || ||||| || ||||| ||||| Sbjct 789586 GGTTTTGCCCGTAAGGGTCTTGACGAAGATCTGCAT 789551 >seq27 Length=788475 Score = 107 bits (118), Expect = 2e-18 Identities = 164/234 (70%), Gaps = 0/234 (0%) Strand=Plus/Minus Query 42950 CTATTGTCCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTA 43009 |||||| || || | | ||| | |||||| |||| ||||||||||||||||| ||||| Sbjct 516462 CTATTGACCACCACGAAGACGGAGCACCAAGTGCAGGGTGCTCTCCTTTTGAATGTTGTA 516403 Query 43010 ATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTC 43069 ||| | || || | |||| || | |||||| || || || || | ||| || ||||| Sbjct 516402 ATCGGAAAGGGTTCTGCCGTCCTCCAACTGCTTTCCTGCAAAGATCAATCGTTGTTGGTC 516343 Query 43070 GGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGA 43129 | || | | |||||||||| ||| || |||| | | | || || ||| Sbjct 516342 AGGTGGAATACCCTCCTTGTCCTGGATCTTCGACTTGACGTTATCAATAGTATCTGACGA 516283 Query 43130 TTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 ||| || || | ||| || || || || || | ||||| |||||||||||||| Sbjct 516282 TTCTACTTCTAACGTAATTGTCTTACCAGTCAAGGTCTTGACAAAGATTTGCAT 516229 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 571813990401400