Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monilinia_20aucupariae_20[genbank_20GCA_5F002162555.1_202017-05-31] 505 sequences; 54,948,206 total letters Query= NC_002816.1 Length=123500 Score E Sequences producing significant alignments: (Bits) Value seq17 123 2e-23 seq27 98.7 8e-16 >seq17 Length=1064257 Score = 123 bits (136), Expect = 2e-23 Identities = 155/213 (73%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 45125 AATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCG 45184 || |||||||| || ||| |||||| || |||||||||||| || || | || Sbjct 789762 AACACCAAGTGAAGGGTGGACTCCTTTTGGATGTTGTAGTCGGAAAGAGTACGGCCATCC 789703 Query 45185 TCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCC 45244 || ||||| ||||| ||||| ||||| |||||||||||||| || | |||||||||||| Sbjct 789702 TCAAGTTGCTTTCCAGCGAAGATCAATCGCTGTTGGTCGGGTGGGATTCCCTCCTTGTCC 789643 Query 45245 GCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTC 45304 || || ||| || | | | ||||| | ||| ||||| | ||| || || Sbjct 789642 TGGATCTTGGACTTGACATTGTCGATGGTGTCCGAAGACTCAACCTCGAGGGTGATGGTT 789583 Query 45305 TTGCCCGTCAGAGTCTTCACAAAGATTTGCATG 45337 |||||||| || ||||| || ||||| |||||| Sbjct 789582 TTGCCCGTAAGGGTCTTGACGAAGATCTGCATG 789550 >seq27 Length=788475 Score = 98.7 bits (108), Expect = 8e-16 Identities = 152/217 (70%), Gaps = 0/217 (0%) Strand=Plus/Minus Query 45110 CCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTC 45169 ||||| | | ||| | |||||||| || || |||||||||||| ||||||||| Sbjct 515999 CCACCACGAAGTCTCAGGACCAAGTGAAGGGTCGACTCCTTCTGAATATTGTAGTCGGAG 515940 Query 45170 AGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGC 45229 || ||| | || || ||||| ||||||||||| ||||| |||||||| ||||| || Sbjct 515939 AGGGTACGACCATCCTCAAGTTGCTTTCCGGCGAAAATCAAACGCTGTTGATCGGGTGGG 515880 Query 45230 ACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACC 45289 | ||||||||| || || ||| ||| || | | | |||| | || || Sbjct 515879 ATACCCTCCTTATCTTGGATCTTTGACTTGACATTATCGATGGTGTCAGAAGATTCGACT 515820 Query 45290 TCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAA 45326 || | ||| || ||||| || || || ||||| |||| Sbjct 515819 TCAAGGGTGATGGTCTTTCCGGTGAGGGTCTTGACAA 515783 Score = 98.7 bits (108), Expect = 8e-16 Identities = 147/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 ||||||||||| ||||||||||| ||||||||||| ||| || | |||| ||| Sbjct 516437 ACCAAGTGCAGGGTGCTCTCCTTTTGAATGTTGTAATCGGAAAGGGTTCTGCCGTCCTCC 516378 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 | || ||||| || || ||||| || |||||||| || || | ||||||||||||| Sbjct 516377 AACTGCTTTCCTGCAAAGATCAATCGTTGTTGGTCAGGTGGAATACCCTCCTTGTCCTGG 516318 Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307 || || ||| || | | | || || || || | ||||| ||||| Sbjct 516317 ATCTTCGACTTGACGTTATCAATAGTATCTGACGATTCTACTTCTAACGTAATTGTCTTA 516258 Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 || |||| ||||| |||||||||||||| Sbjct 516257 CCAGTCAAGGTCTTGACAAAGATTTGCAT 516229 Score = 96.9 bits (106), Expect = 3e-15 Identities = 91/115 (79%), Gaps = 1/115 (1%) Strand=Plus/Minus Query 45130 CAAG-TGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCA 45188 |||| || ||||| |||||| |||||||||||||| ||| |||| | || || | Sbjct 515697 CAAGATGGAGCGTAGACTCCTTTTGAATGTTGTAGTCACTCAAGGTGCGACCATCCTCAA 515638 Query 45189 GTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTC 45243 |||| ||||||||||| ||||| |||||||||||||| || | |||||||| || Sbjct 515637 GTTGCTTTCCGGCGAAAATCAAACGCTGTTGGTCGGGGGGAATTCCCTCCTTATC 515583 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 395072768435605