Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Monilinia_20aucupariae_20[genbank_20GCA_5F002162555.1_202017-05-31]
505 sequences; 54,948,206 total letters
Query= NC_002816.1
Length=123500
Score E
Sequences producing significant alignments: (Bits) Value
seq17 123 2e-23
seq27 98.7 8e-16
>seq17
Length=1064257
Score = 123 bits (136), Expect = 2e-23
Identities = 155/213 (73%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 45125 AATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCG 45184
|| |||||||| || ||| |||||| || |||||||||||| || || | ||
Sbjct 789762 AACACCAAGTGAAGGGTGGACTCCTTTTGGATGTTGTAGTCGGAAAGAGTACGGCCATCC 789703
Query 45185 TCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCC 45244
|| ||||| ||||| ||||| ||||| |||||||||||||| || | ||||||||||||
Sbjct 789702 TCAAGTTGCTTTCCAGCGAAGATCAATCGCTGTTGGTCGGGTGGGATTCCCTCCTTGTCC 789643
Query 45245 GCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTC 45304
|| || ||| || | | | ||||| | ||| ||||| | ||| || ||
Sbjct 789642 TGGATCTTGGACTTGACATTGTCGATGGTGTCCGAAGACTCAACCTCGAGGGTGATGGTT 789583
Query 45305 TTGCCCGTCAGAGTCTTCACAAAGATTTGCATG 45337
|||||||| || ||||| || ||||| ||||||
Sbjct 789582 TTGCCCGTAAGGGTCTTGACGAAGATCTGCATG 789550
>seq27
Length=788475
Score = 98.7 bits (108), Expect = 8e-16
Identities = 152/217 (70%), Gaps = 0/217 (0%)
Strand=Plus/Minus
Query 45110 CCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTC 45169
||||| | | ||| | |||||||| || || |||||||||||| |||||||||
Sbjct 515999 CCACCACGAAGTCTCAGGACCAAGTGAAGGGTCGACTCCTTCTGAATATTGTAGTCGGAG 515940
Query 45170 AGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGC 45229
|| ||| | || || ||||| ||||||||||| ||||| |||||||| ||||| ||
Sbjct 515939 AGGGTACGACCATCCTCAAGTTGCTTTCCGGCGAAAATCAAACGCTGTTGATCGGGTGGG 515880
Query 45230 ACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACC 45289
| ||||||||| || || ||| ||| || | | | |||| | || ||
Sbjct 515879 ATACCCTCCTTATCTTGGATCTTTGACTTGACATTATCGATGGTGTCAGAAGATTCGACT 515820
Query 45290 TCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAA 45326
|| | ||| || ||||| || || || ||||| ||||
Sbjct 515819 TCAAGGGTGATGGTCTTTCCGGTGAGGGTCTTGACAA 515783
Score = 98.7 bits (108), Expect = 8e-16
Identities = 147/209 (70%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187
||||||||||| ||||||||||| ||||||||||| ||| || | |||| |||
Sbjct 516437 ACCAAGTGCAGGGTGCTCTCCTTTTGAATGTTGTAATCGGAAAGGGTTCTGCCGTCCTCC 516378
Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247
| || ||||| || || ||||| || |||||||| || || | |||||||||||||
Sbjct 516377 AACTGCTTTCCTGCAAAGATCAATCGTTGTTGGTCAGGTGGAATACCCTCCTTGTCCTGG 516318
Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307
|| || ||| || | | | || || || || | ||||| |||||
Sbjct 516317 ATCTTCGACTTGACGTTATCAATAGTATCTGACGATTCTACTTCTAACGTAATTGTCTTA 516258
Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCAT 45336
|| |||| ||||| ||||||||||||||
Sbjct 516257 CCAGTCAAGGTCTTGACAAAGATTTGCAT 516229
Score = 96.9 bits (106), Expect = 3e-15
Identities = 91/115 (79%), Gaps = 1/115 (1%)
Strand=Plus/Minus
Query 45130 CAAG-TGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCA 45188
|||| || ||||| |||||| |||||||||||||| ||| |||| | || || |
Sbjct 515697 CAAGATGGAGCGTAGACTCCTTTTGAATGTTGTAGTCACTCAAGGTGCGACCATCCTCAA 515638
Query 45189 GTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTC 45243
|||| ||||||||||| ||||| |||||||||||||| || | |||||||| ||
Sbjct 515637 GTTGCTTTCCGGCGAAAATCAAACGCTGTTGGTCGGGGGGAATTCCCTCCTTATC 515583
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 395072768435605
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |