Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Monilinia_20aucupariae_20[genbank_20GCA_5F002162555.1_202017-05-31]
505 sequences; 54,948,206 total letters
Query= NC_003225.3
Length=309286
Score E
Sequences producing significant alignments: (Bits) Value
seq3 98.7 2e-15
seq10 87.8 4e-12
>seq3
Length=2715537
Score = 98.7 bits (108), Expect = 2e-15
Identities = 157/225 (70%), Gaps = 3/225 (1%)
Strand=Plus/Minus
Query 101851 CATCAAGAAGAAGGAGCAGTGGGCTATTAATTGGATGCAAAGCAATAACGAT---TTGGC 101907
||| || ||||||| | |||||| | || ||||| ||| ||| ||| | || ||
Sbjct 2405882 CATTAAAAAGAAGGCCGACTGGGCTGTCAAGTGGATTCAAGACAAGAACTCTACCTTTGC 2405823
Query 101908 GGAACTAATTGTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATC 101967
||| | || || || ||||| |||||||| || ||||| || | ||||||||
Sbjct 2405822 TCAACGTCTCGTCGCATTCGCTGCCGTTGAAGGTATTTTCTTCTCCGGATCCTTCGCATC 2405763
Query 101968 CATTTTCTGGATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCAT 102027
|| |||||| ||||||| | ||| | || | || || || | |||||| || ||||
Sbjct 2405762 TATCTTCTGGCTCAAGAAGCGTGGTCTCATGGCCGGACTTACTTTCTCCAACGAACTCAT 2405703
Query 102028 TTCTAGGGACGAAGGTCTTCATCGCGACTTTGCATGCATGCTGTT 102072
|| | ||||||||||| || |||||| |||||| | || ||
Sbjct 2405702 CTCCCGTGACGAAGGTCTCCACACCGACTTCGCATGCCTCCTCTT 2405658
>seq10
Length=1606734
Score = 87.8 bits (96), Expect = 4e-12
Identities = 162/234 (69%), Gaps = 8/234 (3%)
Strand=Plus/Plus
Query 35390 GCAGAGGGAGATTTGGGACCCGTATACGGATTCCAATGGCGTCATTTTGGTGCTGAATA- 35448
|| || ||||| || || |||||||| ||||| |||||||| |||||||||||| ||||
Sbjct 1402360 GCTGAAGGAGACTTAGGTCCCGTATATGGATTTCAATGGCGCCATTTTGGTGCTAAATAT 1402419
Query 35449 --TGATACCTGTTCTTCCGATTATACTGGAAAGGGTATTGATCAATTGGCCAATATACTA 35506
|||| || | |||||||| || |||| ||||||| ||| | | || |
Sbjct 1402420 ATTGATGCC---GAGACGGATTATACAGGCCAGGGCGTTGATCAGTTGTCGGAAATTGTG 1402476
Query 35507 AAGACCCTGAGAGAA-AATCCAGATGATAGAAGGATGATTATGACGGCATGGAATCCTAT 35565
|| | | |||| ||||| || || ||||| || | | || ||||||
Sbjct 1402477 TGGA-AATTAAAGAATAATCCTTGGGACAGGAGGATCATCCTAAGTGCGTGGAATGTGGC 1402535
Query 35566 GGATCTTCACCTTATGGCTCTTCCTCCATGCCACATGACTGCTCAATTTTATGT 35619
|||| || | | |||||||| || || || || ||| |||||||||||||||
Sbjct 1402536 GGATATTAAGTTGATGGCTCTACCGCCTTGTCATATGTTTGCTCAATTTTATGT 1402589
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 989577597082275
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |