Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monilinia_20aucupariae_20[genbank_20GCA_5F002162555.1_202017-05-31] 505 sequences; 54,948,206 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq3 98.7 2e-15 seq10 87.8 4e-12 >seq3 Length=2715537 Score = 98.7 bits (108), Expect = 2e-15 Identities = 157/225 (70%), Gaps = 3/225 (1%) Strand=Plus/Minus Query 101851 CATCAAGAAGAAGGAGCAGTGGGCTATTAATTGGATGCAAAGCAATAACGAT---TTGGC 101907 ||| || ||||||| | |||||| | || ||||| ||| ||| ||| | || || Sbjct 2405882 CATTAAAAAGAAGGCCGACTGGGCTGTCAAGTGGATTCAAGACAAGAACTCTACCTTTGC 2405823 Query 101908 GGAACTAATTGTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATC 101967 ||| | || || || ||||| |||||||| || ||||| || | |||||||| Sbjct 2405822 TCAACGTCTCGTCGCATTCGCTGCCGTTGAAGGTATTTTCTTCTCCGGATCCTTCGCATC 2405763 Query 101968 CATTTTCTGGATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCAT 102027 || |||||| ||||||| | ||| | || | || || || | |||||| || |||| Sbjct 2405762 TATCTTCTGGCTCAAGAAGCGTGGTCTCATGGCCGGACTTACTTTCTCCAACGAACTCAT 2405703 Query 102028 TTCTAGGGACGAAGGTCTTCATCGCGACTTTGCATGCATGCTGTT 102072 || | ||||||||||| || |||||| |||||| | || || Sbjct 2405702 CTCCCGTGACGAAGGTCTCCACACCGACTTCGCATGCCTCCTCTT 2405658 >seq10 Length=1606734 Score = 87.8 bits (96), Expect = 4e-12 Identities = 162/234 (69%), Gaps = 8/234 (3%) Strand=Plus/Plus Query 35390 GCAGAGGGAGATTTGGGACCCGTATACGGATTCCAATGGCGTCATTTTGGTGCTGAATA- 35448 || || ||||| || || |||||||| ||||| |||||||| |||||||||||| |||| Sbjct 1402360 GCTGAAGGAGACTTAGGTCCCGTATATGGATTTCAATGGCGCCATTTTGGTGCTAAATAT 1402419 Query 35449 --TGATACCTGTTCTTCCGATTATACTGGAAAGGGTATTGATCAATTGGCCAATATACTA 35506 |||| || | |||||||| || |||| ||||||| ||| | | || | Sbjct 1402420 ATTGATGCC---GAGACGGATTATACAGGCCAGGGCGTTGATCAGTTGTCGGAAATTGTG 1402476 Query 35507 AAGACCCTGAGAGAA-AATCCAGATGATAGAAGGATGATTATGACGGCATGGAATCCTAT 35565 || | | |||| ||||| || || ||||| || | | || |||||| Sbjct 1402477 TGGA-AATTAAAGAATAATCCTTGGGACAGGAGGATCATCCTAAGTGCGTGGAATGTGGC 1402535 Query 35566 GGATCTTCACCTTATGGCTCTTCCTCCATGCCACATGACTGCTCAATTTTATGT 35619 |||| || | | |||||||| || || || || ||| ||||||||||||||| Sbjct 1402536 GGATATTAAGTTGATGGCTCTACCGCCTTGTCATATGTTTGCTCAATTTTATGT 1402589 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989577597082275