Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monilinia_20aucupariae_20[genbank_20GCA_5F002162555.1_202017-05-31] 505 sequences; 54,948,206 total letters Query= NC_003389.1 Length=146454 Score E Sequences producing significant alignments: (Bits) Value seq8 138 1e-27 >seq8 Length=1964072 Score = 138 bits (152), Expect = 1e-27 Identities = 386/587 (66%), Gaps = 4/587 (1%) Strand=Plus/Minus Query 37966 AATCCTGGACATTCGCATGGACACATTAGAGACCATTCTTCATCTTTTTCTACGCGTTCC 38025 || || ||||||||| || ||||| |||| ||| ||| ||| ||||| || || | | Sbjct 140885 AAACCCGGACATTCGTTGGGGCACATAAGAGTCCACTCTCCATTCTTTTCAACACGCTTC 140826 Query 38026 ATAAATAAATCAGGTACCCATAATGCAGTA-AATAAATCTTTGGTTCTATATTCTTCGTT 38084 ||||||| |||||| | ||| || || ||| || | ||| | | | |||||| || Sbjct 140825 ATAAATAGATCAGGAATCCACAAGGC-GTAGAAGAGATCACGTGCACGAACTTCTTCCTT 140767 Query 38085 CCCTACATTCTTTCTTAAGCTTAGAAAATCGAATATATCAGCGTGCCATGGTTCTATATA 38144 || |||||| | | ||||| ||||| | ||||| ||||||||||| | || Sbjct 140766 GCCATGATTCTTGCGCAGATCAAGAAACTCGAAAACGTCAGCATGCCATGGTTCAAGGTA 140707 Query 38145 AATCGACATTGCTCCTGGTCTTTTATCACCTCCCTGATTAATATATCTAACTGTGTTATT 38204 ||| | | || || |||| |||| ||| || |||| || |||||| | ||||| || Sbjct 140706 AATAGCGAAAGCACCAGGTCGCTTATTACCACCTTGATCAACATATCTGGCGGTGTTGTT 140647 Query 38205 ATATATTCTTAACATAGGTACTATACCATTAGATTTGCCGTTTATACCGGATATATAAGT 38264 | | || | |||||| || || || || || || ||||| | |||| || || | Sbjct 140646 GAAAACTCGGAGCATAGGGACAATGCCGTTGGAGTTTCCGTTGGTGCCGGCGATGTATGC 140587 Query 38265 ACCCTTAGCTCGTATATTACTTATCG-ACAATCCTATTCCACCTGCATGTTTTGATATTA 38323 ||| |||| || || | | | || | || || ||||| |||| || || || | Sbjct 140586 ACCAGTAGCACGGAT-TCTGTGAACGTTGAGACCAATACCACCGGCATTCTTCGAAATCA 140528 Query 38324 AAGCGCATTGTTTTAACGTATCAAATATACCTTCTATACTGTCATCCTTTATTGGTAGTA 38383 || || || || || || | ||||| || |||||||| ||||| || | | Sbjct 140527 TGGCACAAATCTTCAAAGTGTCGTAAATACCATCAATACTGTCCTCCTTCATGTCGATGA 140468 Query 38384 TAAAACAACTAGACATTTGAGGCAATGGAGTTCCGGCGTTAAATAATGTAGGAGATGCAT 38443 || || || | ||| | ||||||||| || || | ||| || || |||| Sbjct 140467 GGAAGCATGATGAAAGTTGTGCTTGTGGAGTTCCCGCAGAGAAGAGTGTCGGGGAGGCAT 140408 Query 38444 GTATGAACCATTTTTCCGACAAATAATTATATGTTTCTATTACATCATCTATATCACCGC 38503 | |||| | || | |||| | || ||||| || || || || |||||| | | Sbjct 140407 GGGTGAAGTACTTGTTTGACATCAAGTTGTATGTCTCGATAGCACTCTCAATATCATCAC 140348 Query 38504 CGTGAATACCTAGAGATACCCTCATTAGCATATGTTGTGGTCTTTCT 38550 | |||||||| | | || | ||| | ||| |||||||| | |||| Sbjct 140347 CATGAATACCAACGGCAACACGCATGATCATTTGTTGTGGACGTTCT 140301 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 468521842437200