Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monilinia_20aucupariae_20[genbank_20GCA_5F002162555.1_202017-05-31] 505 sequences; 54,948,206 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq8 241 2e-58 seq3 113 6e-20 >seq8 Length=1964072 Score = 241 bits (266), Expect = 2e-58 Identities = 1303/2066 (63%), Gaps = 49/2066 (2%) Strand=Plus/Minus Query 64839 GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGA 64898 || |||||||| || || || || | | ||||||| |||||||||||| || || | | Sbjct 142064 GTAAATTGAATAGGGGCCGAAGCAGCCATGGTACGTAAATAGTACATTCCGGTCTTCAAA 142005 Query 64899 CCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATA 64958 || || |||| || ||| |||||| || | ||| | ||||| || Sbjct 142004 CCCAGTTTCCAACCAGCAAAGTGCATAGATGTAATCTTGCCCATTGTAGGATCCTTCATG 141945 Query 64959 TGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATG 65018 || || ||||| ||||| ||||||||||||||| || | || |||||||| | | | Sbjct 141944 TGAATGTTCATCGATTGGGATTGATCGATGAAGGCACCACGATCGGCAGCCATCTGAACG 141885 Query 65019 ATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAGG 65078 || || || | ||||||||||| ||| || |||| ||| ||||| |||| | Sbjct 141884 ATTGTTCGCTGAGAAATTTCCCAAACAGTCTTGTAAAGGGCCTTGATATCAGCTGGGATA 141825 Query 65079 TTTGTA---TTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGATCTCATCATTC 65135 || | | || || |||||||| ||||| || || || | ||||| || | || | Sbjct 141824 TTAGGAATGTTTTGGATGGATCCGCCATCAGCGATGATACGGTTCTTCATGTTGTCCGAC 141765 Query 65136 CATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTCCA 65195 || | | ||| | | | || || ||||| || ||||| ||||||||| Sbjct 141764 CAAAGACCCATATCGACGAGGTCCTTGAGAAGCCATGGATTGACGACTTGGAATTCTCCA 141705 Query 65196 GACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAGACTCATTATTTCCC 65255 | | || | |||| |||||| || || || ||||| | | | ||||| || Sbjct 141704 GCAAGAACACGACGAGAGTAAATGTTTGAAGTGTAAGGTTCGAAACATTCATTGAAACCA 141645 Query 65256 AAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTAAGACCG 65315 | |||||| | || ||||| ||||| ||||| || | | | || | || ||| Sbjct 141644 AGAATTTGGGATGTGCTAGCAGTTGGCATGGGTGCAACGAGGAGAGAGTTGCGAACTCCG 141585 Query 65316 TATGTTCTGATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATCCGACGGTACAACNNNN 65375 | | |||| | || | || ||||||| ||| | ||| ||| ||| Sbjct 141584 TGTTGCTTGATGGATTGCTTCAAAGAGTCCCAATCCCACAAATCACTAGGTGTAACACCC 141525 Query 65376 NNNNNNNNNNNTTGTAGAATACCGTT----ACTGGCGTACGATCCTACATATGTATCGTA 65431 ||| || ||| || ||||| | | ||| |||| || || || Sbjct 141524 CACATGTCGTATTGGAGTTCACCCTTGGAGACTGGAG----AGCCTTCATAGGTTTCATA 141469 Query 65432 TGGTCCTTCCTTCTCAGCTAGTTC-ACAACTCGCCTCTAATGCACCGTAATAAATGGTTT 65490 ||| || || || || | || || | || || ||| | | || ||||| | Sbjct 141468 TGGACCAAGCTCCTTTGCAATCTCGACGGATGAGGTC-AAGGCAGCATGGTAGATGGTCT 141410 Query 65491 CGAAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTATCAAATGGATAATTTAAGAG-- 65548 |||| || | | || || | | ||||| | || |||||| | | |||| Sbjct 141409 CGAAAATTTGGATGTTGAGGTGCTTAGCTTCTGGAGAGTCGAATGGA-AGTCGGAGAGCC 141351 Query 65549 AATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGA 65608 || ||| || || || | || |||||||| | | ||||||||| || | ||| Sbjct 141350 AAGAAA-GCATCAGCAAGACCCTGAACACCGACAGCGATAGGTCGGTGACGGAAATTGCT 141292 Query 65609 GATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTTCTGAC 65668 | | |||||| ||| || ||||| || || | || || || || | |||||| || Sbjct 141291 CTTCTTGGCTTCTTGAACTGGGTAATAGTTGATGTTGATGATCTTGTTCAAATTTCTAAC 141232 Query 65669 AATTACTT---TGACCACATCCTTCAGTTTGAGAAAATCAAA---TCGCTCATCTATT-- 65720 || || | ||||| || | || ||| | |||||| | || ||||| || Sbjct 141231 AACAACCTGAGTGACC---TCGTGAAGCTTGTGGAAATCATAAGTTCCCTCATTCATGTT 141175 Query 65721 -ACAAACATGTTCAATGCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGC 65779 ||||| | ||| || | ||| |||| |||||| || ||||||| | | | Sbjct 141174 GACAAAAGTTGGCAAAGCGATAGAAGCCAAGTTACAACAAGCAACCTCATCTGGCGCAGA 141115 Query 65780 ATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATT 65839 || | | ||||| ||||| | || | || || || | || | ||| || Sbjct 141114 GTACTCGACAATCTCTGTGCATAAGTTGGAGCTGCGAATAGTACCAAGGTTCTTTTGGTT 141055 Query 65840 ACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGA 65899 |||||| ||||| || ||||| || ||||| ||||| ||| | || || || | || | Sbjct 141054 ACTCTTCTTGTTGCATGCATCTTTGTAAAGCATGAAAGGATTTCCCGTCTCGGTTTGGGC 140995 Query 65900 TTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGATTTGTATCTCTTTTCT-- 65957 || | ||| | | ||| | | ||||||| || || ||| | ||| | Sbjct 140994 CTCGAGAATAGAGTACCAAAGCTTTTGAGCCTTGAT---AGTCTTGCGACCCTTGCCAGC 140938 Query 65958 CTT-TCGTATAGTGT-ATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAATCCAG 66015 ||| ||||| | | | ||| | |||||||| || || |||||| |||| || | Sbjct 140937 CTTCTCGTA-ACTCTCATAGAGAGCCTCGAACTCTTCGCCATAAACATCTGCCAAACCCG 140879 Query 66016 GACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGA 66075 ||||||| | || ||||| | | ||||||||| | | | || || |||||||| | Sbjct 140878 GACATTCGTTGGGGCACATAAGAGTCCACTCTCCATTCTTTTCAACACGCTTCATAAATA 140819 Query 66076 GATCAGGAATCCAAAGAGCTATAAATAAATCTCTGGTTCTATGTTCCTCGTTTCCTGTAT 66135 ||||||||||||| | || || | ||| | | | | ||| || || || || Sbjct 140818 GATCAGGAATCCACAAGGCGTAGAAGAGATCACGTGCACGAACTTCTTCCTTGCCATGAT 140759 Query 66136 TCTTTTTAAGATCGAGGAACGCCATAATATCATAATGCCACGGTTCCAAGTATATGGCCA 66195 |||| ||||| || ||| | | || ||| |||||| ||||| | ||| || || | Sbjct 140758 TCTTGCGCAGATCAAGAAACTCGAAAACGTCAGCATGCCATGGTTCAAGGTAAATAGCGA 140699 Query 66196 TAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTC 66255 | | ||||| || || || || || ||||| | ||||| |||||||| || |||||| Sbjct 140698 AAGCACCAGGTCGCTTATTACCACCTTGATCAACATATCTGGCGGTGTTGTTGAAAACTC 140639 Query 66256 TCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCGGAGATATAGCTTCCACTTG 66315 | ||| || | ||| || ||||| | || ||||| |||| ||| || ||| | | Sbjct 140638 GGAGCATAGGGACAATGCCGTTGGAGTTTCCGTTGGTGCCGGCGATGTATGCACCAGTAG 140579 Query 66316 CACGAATATTACTAA--TTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCA 66373 |||| || | || ||| ||||| || || || || | || || || | || || Sbjct 140578 CACGGATTCTGTGAACGTTG--AGACCAATACCACCGGCATTCTTCGAAATCATGGCACA 140521 Query 66374 TCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACA 66433 || || || || || || || || ||||| || ||| |||||| | || || || Sbjct 140520 AATCTTCAAAGTGTCGTAAATACCATCAATACTGTCCTCCTTCATGTCGATGAGGAAGCA 140461 Query 66434 GCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAA 66493 || | ||| | |||||||||| || | || || || || || || || Sbjct 140460 TGATGAAAGTTGTGCTTGTGGAGTTCCCGCAGAGAAGAGTGTCGGGGAGGCATGGGTGAA 140401 Query 66494 CCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAAT 66553 | || | || | | ||||| ||||| ||||| || ||||| |||||| Sbjct 140400 GTACTTGTTTGACATCAAGTTGTATGTCTCGATAGCACTCTCAATATCATCACCATGAAT 140341 Query 66554 TCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTT 66613 || || || |||||||| | ||| || || || | ||| | | ||| | | Sbjct 140340 ACCAACGGCAACACGCATGATCATTTGTTGTGGACGTTCTGCAACTTTGCCATCGAGGCG 140281 Query 66614 CAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTC 66673 | | ||| ||| | || | ||| || || || || || | ||| |||||||| || Sbjct 140280 TAGAAGGTATGATCTCTCGAGAGTCTTGAACCCGAAGTATTGGTAGTTGAAGTCTCGGTC 140221 Query 66674 GTAAATAATAACCGAGTTGAGTTTATCCTTATATTTGTTAACTACATCCATGGTAA---T 66730 || | |||| | |||||||||| |||| || | | | || ||| | |||| | Sbjct 140220 ATAGACAATAGCAGAGTTGAGTTCCTCCTCATGTCTCATGAC-GCAT---TCGTAAGTTT 140165 Query 66731 ACTTG-AAATAATCGGAGAATGTTTCCCATTTTTAGGATTGACATAGTTGAATAAATCCT 66789 |||| ||| || ||||| | | |||||| | || || || | | ||||||| Sbjct 140164 CCTTGCTAATCATAGGAGATGGGGTGCCATTTCTTGGGTTTGTGTATTGGTATAAATCGC 140105 Query 66790 CCATCACTTCACTAAATAGtttttttGTTTCTTTGTGTAGATTTGATACGGCTATTCTAG 66849 || || | |||| |||| || |||| |||||| || || || || || || | || Sbjct 140104 GGATAACGTGGGAAAATTGTTTCTTGGTTTGTTTGTGGAGGTTCGAGACAGCAATACGAG 140045 Query 66850 CGGCTATAATGGCATAATCCGGATGT 66875 | |||| |||||||||||| |||||| Sbjct 140044 CAGCTAGAATGGCATAATCTGGATGT 140019 >seq3 Length=2715537 Score = 113 bits (124), Expect = 6e-20 Identities = 228/334 (68%), Gaps = 7/334 (2%) Strand=Plus/Plus Query 36380 GTCTCTATAGCATTAAAGAGATA-Gtttttt-tCATTACTATCTTTAACATATGTATCAA 36437 || || ||||| || ||||| || || |||| | || || | || | |||||| || | Sbjct 2405951 GTGTCAATAGCGTTGAAGAGGTATGTCTTTTGTGCTTGCT--CCTTGATATATGTGTCGA 2406008 Query 36438 TCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAAC 36497 | | |||| || |||| ||||||||||| || || ||||| || |||||||| | Sbjct 2406009 TGAGAAGAGAGTATGTTTCAGAATGAATGTTCTCCATCATGATTTGGAAACCGTAGAAGC 2406068 Query 36498 ATCTAGCCTCGGTAATCTGTACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTA 36557 |||| ||||| | || || ||||| || ||||| ||| | || || ||||| || | Sbjct 2406069 ATCTTGCCTCTGGGATTTGAACTTCACCACTGAATCGCTCTACCAAGTTCTCATTGACAA 2406128 Query 36558 TTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTTTGGTG 36617 |||||||| ||||| || || || | || || || || || || | Sbjct 2406129 TTCCGTCAGATGCTGCGAAGAATGCGAGAACGTGCGAGATGAAGTAGCGCTCATCATCAT 2406188 Query 36618 TTAGT---TTATTCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAA 36674 | ||| || ||||| || | | ||| || || | ||| | ||||| | ||||| | Sbjct 2406189 TGAGTCTGTTGTTCCAGTCGTGAAGATCCTTTGACAAATCGATCTCTTCTGCGGTCCAGA 2406248 Query 36675 ATGATGCCTCTGCCTTTTTATACATATTCCAGAT 36708 | |||||||||||||| || ||||| | |||||| Sbjct 2406249 AAGATGCCTCTGCCTTCTTGTACATCTGCCAGAT 2406282 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658168645284200