Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monilinia_20aucupariae_20[genbank_20GCA_5F002162555.1_202017-05-31] 505 sequences; 54,948,206 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq8 275 9e-69 seq3 158 2e-33 >seq8 Length=1964072 Score = 275 bits (304), Expect = 9e-69 Identities = 1314/2067 (64%), Gaps = 51/2067 (2%) Strand=Plus/Minus Query 78718 GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGA 78777 || |||||||| || || || || | | ||||||| |||||||||||| || || | | Sbjct 142064 GTAAATTGAATAGGGGCCGAAGCAGCCATGGTACGTAAATAGTACATTCCGGTCTTCAAA 142005 Query 78778 CCGAGACTCCATCCGTAGAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATA 78837 || || |||| || || |||||| || | ||| | ||||| || Sbjct 142004 CCCAGTTTCCAACCAGCAAAGTGCATAGATGTAATCTTGCCCATTGTAGGATCCTTCATG 141945 Query 78838 TGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATG 78897 || || ||||| ||||| ||||||||||||||| || | || |||||||| | | | Sbjct 141944 TGAATGTTCATCGATTGGGATTGATCGATGAAGGCACCACGATCGGCAGCCATCTGAACG 141885 Query 78898 ATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAGG 78957 || || || | ||||||||||| ||| || |||| ||| ||||| |||| | Sbjct 141884 ATTGTTCGCTGAGAAATTTCCCAAACAGTCTTGTAAAGGGCCTTGATATCAGCTGGGATA 141825 Query 78958 TTTGTA---TTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGATCTCTTCATTC 79014 || | | || || |||||||| ||||| || || || | ||||| || | || | Sbjct 141824 TTAGGAATGTTTTGGATGGATCCGCCATCAGCGATGATACGGTTCTTCATGTTGTCCGAC 141765 Query 79015 CATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTCCA 79074 || | | ||| | | | || || ||||| || ||||| ||||||||| Sbjct 141764 CAAAGACCCATATCGACGAGGTCCTTGAGAAGCCATGGATTGACGACTTGGAATTCTCCA 141705 Query 79075 GACAATACTCTCCGAGTGTAAATATTACTGGTATATGGTTCCACCGATTCATTATTTCCC 79134 | | || | |||| |||||| || || || ||||| | ||||||| || Sbjct 141704 GCAAGAACACGACGAGAGTAAATGTTTGAAGTGTAAGGTTCGAAACATTCATTGAAACCA 141645 Query 79135 AAAATTTGAGCAGTTGATGCCGTTGGCATAGGTGCCACCAATAAACTATTTCTAAGACCG 79194 | |||||| | || || |||||||| ||||| || | | | || | || ||| Sbjct 141644 AGAATTTGGGATGTGCTAGCAGTTGGCATGGGTGCAACGAGGAGAGAGTTGCGAACTCCG 141585 Query 79195 TATGATCTGATTTTATCTTTTAGAGATTCCCAATCCCAAAGATCAGACGGGACAACATTC 79254 | | |||| | || | ||| ||||||||||| | |||| || |||| | Sbjct 141584 TGTTGCTTGATGGATTGCTTCAAAGAGTCCCAATCCCACAAATCACTAGGTGTAACACCC 141525 Query 79255 CAAAGATCATATTGTAGAATACCGTT----ACTAGCGTATGATCCTGTGTATGTTTCATA 79310 || | || ||||| || ||| || ||| | | | ||| || |||||||| Sbjct 141524 CACATGTCGTATTGGAGTTCACCCTTGGAGACTGGAG----AGCCTTCATAGGTTTCATA 141469 Query 79311 AGGTCCT---TCCTTTTCGGCTAATTC-ACAACTCGCCTCTAATGCTCCGTAATAAATGG 79366 || || |||||| || | || || | || || || | | || |||| Sbjct 141468 TGGACCAAGCTCCTTT---GCAATCTCGACGGATGAGGTC-AAGGCAGCATGGTAGATGG 141413 Query 79367 TTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCTAGGCTATCAAATGGATAATTTAAGA 79426 | |||||||| | | ||||| | | |||||| | || |||||| | | ||| Sbjct 141412 TCTCGAAAATTTGGATGTTGAGGTGCTTAGCTTCTGGAGAGTCGAATGGA-AGTCGGAGA 141354 Query 79427 G--AATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATT 79484 | || ||| || || || | || |||||||| | | ||||||||| || | ||| Sbjct 141353 GCCAAGAAA-GCATCAGCAAGACCCTGAACACCGACAGCGATAGGTCGGTGACGGAAATT 141295 Query 79485 AGAAATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTCCT 79544 | | |||||| ||| || ||||| || || | || || || || | ||| || Sbjct 141294 GCTCTTCTTGGCTTCTTGAACTGGGTAATAGTTGATGTTGATGATCTTGTTCAAATTTCT 141235 Query 79545 GACTATTACTT---TGACCACATCCTTTAGTTTGAGAAAATCAAATCGTCCATC-----T 79596 || | || | ||||| || | || ||| | |||||| | ||| || | Sbjct 141234 AACAACAACCTGAGTGACC---TCGTGAAGCTTGTGGAAATCATAAGTTCCCTCATTCAT 141178 Query 79597 ATT-ACAAACATGTTCAACGCGACAGATGCCAGATTACAAACGGCTACCTCATTAGCATC 79655 || ||||| | ||| |||| ||| |||| |||||| || ||||||| | | Sbjct 141177 GTTGACAAAAGTTGGCAAAGCGATAGAAGCCAAGTTACAACAAGCAACCTCATCTGGCGC 141118 Query 79656 CGCATATTGTATTATTTCAGTGCAGAGGTTACTACACTTAATGGTTCCTAAATTTTGTTG 79715 | || | | || || ||||| | ||| | ||| || || | || | ||| Sbjct 141117 AGAGTACTCGACAATCTCTGTGCATAAGTTGGAGCTGCGAATAGTACCAAGGTTCTTTTG 141058 Query 79716 ATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAACGGAGTACCAGTTTCAATCTG 79775 |||||||| ||||| || ||||| || ||||| ||||| ||| | || || || | || Sbjct 141057 GTTACTCTTCTTGTTGCATGCATCTTTGTAAAGCATGAAAGGATTTCCCGTCTCGGTTTG 140998 Query 79776 AGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGACTTGTATCTCTTTTC 79835 | || | ||| | | ||| | | ||||||| || || |||| | ||| | Sbjct 140997 GGCCTCGAGAATAGAGTACCAAAGCTTTTGAGCCTTGAT---AGTCTTGCGACCCTTGCC 140941 Query 79836 T--CTT-TCGTATTGTGTATATAATCGTTCGAACTCGTCTCCCCAAACATCGTCTAATCC 79892 ||| ||||| ||| | |||||||| || || ||||||| | || || Sbjct 140940 AGCCTTCTCGTAACTCTCATAGAGAGCCTCGAACTCTTCGCCATAAACATCTGCCAAACC 140881 Query 79893 AGGACATTCGTCAGGACACATCAACGACCACTCTCCATCATCCTTT--ACTCGTTTCATA 79950 |||||||||| || ||||| | | ||||||||||| || ||| || || |||||| Sbjct 140880 CGGACATTCGTTGGGGCACATAAGAGTCCACTCTCCAT--TCTTTTCAACACGCTTCATA 140823 Query 79951 AAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGCTCCTCGTTTCCT 80010 || |||||||||||||| | || || ||||| | | | | || || || || Sbjct 140822 AATAGATCAGGAATCCACAAGGCGTAGAAGAGATCACGTGCACGAACTTCTTCCTTGCCA 140763 Query 80011 GTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATG 80070 |||||| ||||| || ||| | | || |||| |||||| ||||| | ||| || Sbjct 140762 TGATTCTTGCGCAGATCAAGAAACTCGAAAACGTCAGCATGCCATGGTTCAAGGTAAATA 140703 Query 80071 GCCATAACTCCCGGTCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAA 80130 || | | | || ||||| || || || || ||||| | ||||| |||||||| || || Sbjct 140702 GCGAAAGCACCAGGTCGCTTATTACCACCTTGATCAACATATCTGGCGGTGTTGTTGAAA 140643 Query 80131 ACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCGGAGATATAGCTTCCA 80190 |||| | ||| || | ||| || ||||| | || ||||| |||| ||| || ||| Sbjct 140642 ACTCGGAGCATAGGGACAATGCCGTTGGAGTTTCCGTTGGTGCCGGCGATGTATGCACCA 140583 Query 80191 CTGGCACGAATATTACTAA--TTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATG 80248 | ||||| || | || ||| ||||| || || || || | || || || | | Sbjct 140582 GTAGCACGGATTCTGTGAACGTTG--AGACCAATACCACCGGCATTCTTCGAAATCATGG 140525 Query 80249 CGCATCGTTTTAACGTATCATAGATGCCCTCTATGCTATCATCAATCATGTTAAGTAGAA 80308 | || || || || || || || || || || || || || |||||| | || | Sbjct 140524 CACAAATCTTCAAAGTGTCGTAAATACCATCAATACTGTCCTCCTTCATGTCGATGAGGA 140465 Query 80309 AACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCG 80368 | || || | ||| | |||||||||| || | || || || || || | Sbjct 140464 AGCATGATGAAAGTTGTGCTTGTGGAGTTCCCGCAGAGAAGAGTGTCGGGGAGGCATGGG 140405 Query 80369 TAAACCATTTTTCAGACAGTAGATTGTACGTCTCAATAGCTGATTCTATATCCCATTGAT 80428 | || | || | |||| | ||||| ||||| ||||| || ||||| || Sbjct 140404 TGAAGTACTTGTTTGACATCAAGTTGTATGTCTCGATAGCACTCTCAATATCATCACCAT 140345 Query 80429 GAATTCCTACCGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTATTTA 80488 |||| || || || |||||||| | ||| || || || | ||| | | ||| || | Sbjct 140344 GAATACCAACGGCAACACGCATGATCATTTGTTGTGGACGTTCTGCAACTTTGCCATCGA 140285 Query 80489 TTTTCAACAAGTAAGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTC 80548 | | ||| ||| | || | ||| || || || || || | ||| ||||||| Sbjct 140284 GGCGTAGAAGGTATGATCTCTCGAGAGTCTTGAACCCGAAGTATTGGTAGTTGAAGTCTC 140225 Query 80549 GTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTTGTTAACTACATCCATGGTGA 80608 | || || | |||| | |||||||||| |||| || | | | || ||| | | Sbjct 140224 GGTCATAGACAATAGCAGAGTTGAGTTCCTCCTCATGTCTCATGAC-GCATTCGTAAGTT 140166 Query 80609 TACTTG-AAATAATCGGAGAATGTTTCCCATTTTTAGGATTAACATAGTTGAATAAATCC 80667 | |||| ||| || ||||| | | |||||| | || || || | | ||||||| Sbjct 140165 TCCTTGCTAATCATAGGAGATGGGGTGCCATTTCTTGGGTTTGTGTATTGGTATAAATCG 140106 Query 80668 TCCATCACTTCACTAAATAGtttttttGTTTCCTTGTGTAGATTTGATACGGCTATTCTG 80727 || || | |||| |||| || |||| ||||| || || || || || || | Sbjct 140105 CGGATAACGTGGGAAAATTGTTTCTTGGTTTGTTTGTGGAGGTTCGAGACAGCAATACGA 140046 Query 80728 GCGGCTAAAATGGCATAATCTGGATGT 80754 || |||| ||||||||||||||||||| Sbjct 140045 GCAGCTAGAATGGCATAATCTGGATGT 140019 >seq3 Length=2715537 Score = 158 bits (174), Expect = 2e-33 Identities = 347/514 (68%), Gaps = 7/514 (1%) Strand=Plus/Plus Query 49669 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTT 49728 |||||||| ||||| || | || |||||||| || ||||| || ||||||| || || Sbjct 2405376 TTTTGGTAATCACCAACTCTCTTCTCGAAAAAGTTGGTTTTGCCGGCCAATGAGATGTTC 2405435 Query 49729 TCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAATC 49788 ||||||||||| || || |||| | | |||| ||| | ||||| | | Sbjct 2405436 TCCATGAAATCGAATGGGTTGGCAGACCTGTAAAATTTCTCGTTGCCCAAAGCGATGAGA 2405495 Query 49789 AATCTATCCGCGACAAATTCTATATATGTTTTCATCAT-TTCACAATTCATTCCTATAAG 49847 | | ||| || || || || || ||| ||||| | ||| | ||||| |||| || Sbjct 2405496 AGACGATCAGCAACGAACTCGATGTATTGCTTCATGAGATTCGCG-TTCATGCCTAAGAG 2405554 Query 49848 TTTAACTGGAAGAGCCGCAGTAAGAAATTCTTGTTCAATGGATACCGCATCTGTTATAAT 49907 | |||||||||| | || | |||||||| || || || || || || || | Sbjct 2405555 AGCACATGGAAGAGCCTCGGTCAAGAATTCTTGCTCGATTTCGACGGCTTCAGTGATGAC 2405614 Query 49908 AGATCTAACGGTTT-CTTCACTCGGTGGATGCAATAAATGTTTAAACATCAAACATGCGA 49966 | | ||||| || ||| | || || ||| | ||| ||| | | ||||||| Sbjct 2405615 ATCTTGAACGGCTTGCTTGGATGGGCGG-TGCTTGAGATGGGAAAAGAGGAGGCATGCGA 2405673 Query 49967 AATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCA 50026 | ||| ||| ||||| ||||| | || ||||||||||| || || ||||||| || Sbjct 2405674 AGTCGGTGTGGAGACCTTCGTCACGGGAGATGAGTTCGTTGGAGAAAGTAAGTCCGGCCA 2405733 Query 50027 TTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAAGATTCCTT 50086 | || |||||||| || ||||| || || || || || || || || ||||| || |||| Sbjct 2405734 TGAGACCACGCTTCTTGAGCCAGAAGATAGATGCGAAGGATCCGGAGAAGAAAATACCTT 2405793 Query 50087 CTACTGCGGCAAAGGCAACAAGTCTCTCTCCATAACTGGCG---CTGTCATGTATCCACT 50143 | || || || || || || || | | || | | | | |||| || ||||||| Sbjct 2405794 CAACGGCAGCGAATGCGACGAGACGTTGAGCAAAGGTAGAGTTCTTGTCTTGAATCCACT 2405853 Query 50144 TTTGAGCCCAATCGGCCTTCTTTTTTACACAAGG 50177 | |||||| |||||||||||||| | ||||| Sbjct 2405854 TGACAGCCCAGTCGGCCTTCTTTTTAATGCAAGG 2405887 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718264265928200