Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Monilinia_20aucupariae_20[genbank_20GCA_5F002162555.1_202017-05-31]
505 sequences; 54,948,206 total letters
Query= NC_004062.1
Length=119217
Score E
Sequences producing significant alignments: (Bits) Value
seq27 89.7 4e-13
>seq27
Length=788475
Score = 89.7 bits (98), Expect = 4e-13
Identities = 156/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 42883 CCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGAC 42942
|| ||||| || | | |||||| || | |||||||||||||| | |||||||||||
Sbjct 516455 CCACCACGAAGACGGAGCACCAAGTGCAGGGTGCTCTCCTTTTGAATGTTGTAATCGGAA 516396
Query 42943 AATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGC 43002
| || | |||| ||||| || || || ||||| |||||||| ||||| || | ||
Sbjct 516395 AGGGTTCTGCCGTCCTCCAACTGCTTTCCTGCAAAGATCAATCGTTGTTGGTCAGGTGGA 516336
Query 43003 ACACCTTCTTTTTCGCTGATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGACG 43062
| ||| || || || |||| | ||||| | ||| || || | || ||
Sbjct 516335 ATACCCTCCTTGTCCTGGATCTTCGACTTGACGTTATCAATAGTATCTGACGATTCTACT 516276
Query 43063 TCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCAT 43109
|||| ||| || || || || || | || || ||||| ||||||||
Sbjct 516275 TCTAACGTAATTGTCTTACCAGTCAAGGTCTTGACAAAGATTTGCAT 516229
Score = 86.0 bits (94), Expect = 5e-12
Identities = 149/217 (69%), Gaps = 0/217 (0%)
Strand=Plus/Minus
Query 42883 CCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGAC 42942
|| ||||| ||||| | ||||| || | || |||||| || | |||||| |||||
Sbjct 515999 CCACCACGAAGTCTCAGGACCAAGTGAAGGGTCGACTCCTTCTGAATATTGTAGTCGGAG 515940
Query 42943 AATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGC 43002
| ||||| | || || | ||| || ||||| |||||||| ||||||||||||| ||
Sbjct 515939 AGGGTACGACCATCCTCAAGTTGCTTTCCGGCGAAAATCAAACGCTGTTGATCGGGTGGG 515880
Query 43003 ACACCTTCTTTTTCGCTGATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGACG 43062
| ||| || || || |||| ||||| | | | ||||| || |||||
Sbjct 515879 ATACCCTCCTTATCTTGGATCTTTGACTTGACATTATCGATGGTGTCAGAAGATTCGACT 515820
Query 43063 TCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAA 43099
|| | || || || |||||||| || || || ||||
Sbjct 515819 TCAAGGGTGATGGTCTTTCCGGTGAGGGTCTTGACAA 515783
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 381367252789290
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |