Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monilinia_20aucupariae_20[genbank_20GCA_5F002162555.1_202017-05-31] 505 sequences; 54,948,206 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq3 116 5e-21 seq8 87.8 3e-12 >seq3 Length=2715537 Score = 116 bits (128), Expect = 5e-21 Identities = 196/281 (70%), Gaps = 2/281 (1%) Strand=Plus/Minus Query 125019 ATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTG 125078 || ||| | |||||||| ||||| |||| || || ||||| | |||||| ||||| || Sbjct 2406282 ATCTGGCAGATGTACAAGAAGGCAGAGGCATCTTTCTGGACCGCAGAAGAGATCGATTTG 2406223 Query 125079 TCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTGAAACTGAGCGAGAGTTTATATCG 125138 || ||||| || |||| ||| | | | | | ||| |||||| | || || ||| Sbjct 2406222 TCAAAGGATCTTCACGACTGGAACAACAGACTCAATGATGATGAGCGCTACTTCATCTCG 2406163 Query 125139 CACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATCTGTTGACACGA 125198 ||| || | || ||||| || | || || ||||| ||||| || || || | ||| Sbjct 2406162 CACGTTCTCGCATTCTTCGCAGCATCTGACGGAATTGTCAATGAGAACTTGGTAGAGCGA 2406103 Query 125199 TTCTCTCAAGA-GTTGACCATTCCAGAGGTGTCGTGCTTTTACGGATTCCAAATCATGAT 125257 ||| | || ||| | || ||||||| ||||| ||||| |||||||||||||| Sbjct 2406102 TTCAGTGGTGAAGTTCAA-ATCCCAGAGGCAAGATGCTTCTACGGTTTCCAAATCATGAT 2406044 Query 125258 TGAGAACGTGCACTCGGAAATGTACTCTACACTGATTGACA 125298 |||||| | || || |||| |||||| || || |||| Sbjct 2406043 GGAGAACATTCATTCTGAAACATACTCTCTTCTCATCGACA 2406003 >seq8 Length=1964072 Score = 87.8 bits (96), Expect = 3e-12 Identities = 210/315 (67%), Gaps = 2/315 (1%) Strand=Plus/Plus Query 96807 ACAAACGGCAACGCCAGTGGCCTAGTGCCAATGCTCAGAATGTACAATG-CAATGTCACG 96865 || ||||| ||| ||| ||| | || || |||||| || | | ||| || | || | Sbjct 140602 ACCAACGGAAACTCCAACGGCATTGTCCCTATGCTCCGAGTTTTCAACAACACCGCCA-G 140660 Query 96866 ATACGTTACACAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCTTG 96925 ||| ||| || || || ||||| || || || ||| | || | ||| | ||||| || Sbjct 140661 ATATGTTGATCAAGGTGGTAATAAGCGACCTGGTGCTTTCGCTATTTACCTTGAACCATG 140720 Query 96926 GCACGCGGACGTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCACG 96985 ||| || |||||||| || ||| | || ||||||| || |||| ||||| | || Sbjct 140721 GCATGCTGACGTTTTCGAGTTTCTTGATCTGCGCAAGAATCATGGCAAGGAAGAAGTTCG 140780 Query 96986 AGCCAGGGACTTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGTCAACGA 97045 || | || | || || || | ||| | || ||| | || |||||||| || | | Sbjct 140781 TGCACGTGATCTCTTCTACGCCTTGTGGATTCCTGATCTATTTATGAAGCGTGTTGAAAA 140840 Query 97046 CGGTGGCTACTGGAGCCTAATGTGCCCCGACTCGTCACCCGGTCTGTCCGATTGCTGGGG 97105 ||| | |||| || ||||||||| || | || ||| || | ||| | || Sbjct 140841 GAATGGAGAGTGGACTCTTATGTGCCCCAACGAATGTCCGGGTTTGGCAGATGTTTATGG 140900 Query 97106 CGAAGAGTTTGAGGC 97120 ||||||||| ||||| Sbjct 140901 CGAAGAGTTCGAGGC 140915 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741054522063800