Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Monilinia_20aucupariae_20[genbank_20GCA_5F002162555.1_202017-05-31]
505 sequences; 54,948,206 total letters
Query= NC_006549.1
Length=140131
Score E
Sequences producing significant alignments: (Bits) Value
seq17 102 7e-17
seq9 93.3 4e-14
seq27 91.5 1e-13
>seq17
Length=1064257
Score = 102 bits (112), Expect = 7e-17
Identities = 152/216 (70%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 94793 CGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAA 94852
|||||||||||||| | || || |||||||| | ||| || ||| | ||| | |
Sbjct 789765 CGCAACACCAAGTGAAGGGTGGACTCCTTTTGGATGTTGTAGTCGGAAAGAGTACGGCCA 789706
Query 94853 TCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTG 94912
||||| || || ||||| | ||||| |||| || || || || || || || || |||
Sbjct 789705 TCCTCAAGTTGCTTTCCAGCGAAGATCAATCGCTGTTGGTCGGGTGGGATTCCCTCCTTG 789646
Query 94913 TCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATG 94972
|| | || || | |||||| | ||| ||||| | || || || | ||||||
Sbjct 789645 TCCTGGATCTTGGACTTGACATTGTCGATGGTGTCCGAAGACTCAACCTCGAGGGTGATG 789586
Query 94973 GTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCATG 95008
||||| || ||||| || || || ||||||||||||
Sbjct 789585 GTTTTGCCCGTAAGGGTCTTGACGAAGATCTGCATG 789550
>seq9
Length=1850997
Score = 93.3 bits (102), Expect = 4e-14
Identities = 114/152 (75%), Gaps = 4/152 (3%)
Strand=Plus/Minus
Query 68442 GTCATTCTAGACGGAAAAGCGTGCGGGTTTATGATAAGATCAGGAACCACTCCGTCTTTA 68501
||||| | ||| |||| |||||||||||| ||||||||||| ||||| || || ||| ||
Sbjct 38109 GTCATACGAGATGGAATAGCGTGCGGGTTAATGATAAGATCGGGAACAACGCCCTCTCTA 38050
Query 68502 TCAAAGGGCATGTCTTCTTGCGATTTCACG--GCGCCGCATGTTCCTTTTTGCGCGGTAA 68559
|| |||||||| | |||| || | ||| ||| ||||||||||| || |
Sbjct 38049 GTGAAAGGCATGTCCTGTTGC-ATGT-ACGTAATACCGATGGTTCCTTTTTGTCCGTGAC 37992
Query 68560 ACGAGGCAAATTTATCACCCATTTCAGGTATC 68591
||| |||||||| ||||| |||| ||| |||
Sbjct 37991 GCGACGCAAATTTGTCACCAATTTGAGGAATC 37960
>seq27
Length=788475
Score = 91.5 bits (100), Expect = 1e-13
Identities = 146/210 (70%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 94798 CACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTC 94857
||||||||||| || |||||||| | ||| |||||| | || || |||||
Sbjct 516438 CACCAAGTGCAGGGTGCTCTCCTTTTGAATGTTGTAATCGGAAAGGGTTCTGCCGTCCTC 516379
Query 94858 CAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATA 94917
|| ||| ||||| ||||||| |||| ||| || || || |||||||| || ||||| |
Sbjct 516378 CAACTGCTTTCCTGCAAAGATCAATCGTTGTTGGTCAGGTGGAATACCCTCCTTGTCCTG 516319
Query 94918 AATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTT 94977
|| || | ||||||| | | ||| || | || || || | ||| || || ||
Sbjct 516318 GATCTTCGACTTGACGTTATCAATAGTATCTGACGATTCTACTTCTAACGTAATTGTCTT 516259
Query 94978 TCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
||||| | || || |||||||| |||||
Sbjct 516258 ACCAGTCAAGGTCTTGACAAAGATTTGCAT 516229
Score = 84.2 bits (92), Expect = 2e-11
Identities = 144/209 (69%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 94799 ACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCC 94858
||||| || || |||||||||||||| | ||| || || || ||| | ||| ||
Sbjct 516209 ACCAAATGTAAGGTAGATTCCTTTTGGATGTTGTAGTCTGACAACGTGCGGCCATCTTCA 516150
Query 94859 AGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAA 94918
||||| || || ||||||| | | || ||||| || |||||||| || || || | |
Sbjct 516149 AGCTGCTTACCAGCAAAGATAAGACGCTGTTGATCAGGTGGAATACCCTCCTTATCTTGA 516090
Query 94919 ATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTT 94978
|| || | ||||| | ||| || || | || || || | |||||||| |||
Sbjct 516089 ATCTTAGATTTGACATTGTCGATCGTATCCGATGACTCAACCTCCAAAGTGATGGTCTTT 516030
Query 94979 CCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
||||| | || || || ||||| |||||
Sbjct 516029 CCAGTCAAGGTCTTAACGAAGATTTGCAT 516001
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 448288370161800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |