Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monilinia_20aucupariae_20[genbank_20GCA_5F002162555.1_202017-05-31] 505 sequences; 54,948,206 total letters Query= NC_006549.1 Length=140131 Score E Sequences producing significant alignments: (Bits) Value seq17 102 7e-17 seq9 93.3 4e-14 seq27 91.5 1e-13 >seq17 Length=1064257 Score = 102 bits (112), Expect = 7e-17 Identities = 152/216 (70%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 94793 CGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAA 94852 |||||||||||||| | || || |||||||| | ||| || ||| | ||| | | Sbjct 789765 CGCAACACCAAGTGAAGGGTGGACTCCTTTTGGATGTTGTAGTCGGAAAGAGTACGGCCA 789706 Query 94853 TCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTG 94912 ||||| || || ||||| | ||||| |||| || || || || || || || || ||| Sbjct 789705 TCCTCAAGTTGCTTTCCAGCGAAGATCAATCGCTGTTGGTCGGGTGGGATTCCCTCCTTG 789646 Query 94913 TCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATG 94972 || | || || | |||||| | ||| ||||| | || || || | |||||| Sbjct 789645 TCCTGGATCTTGGACTTGACATTGTCGATGGTGTCCGAAGACTCAACCTCGAGGGTGATG 789586 Query 94973 GTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCATG 95008 ||||| || ||||| || || || |||||||||||| Sbjct 789585 GTTTTGCCCGTAAGGGTCTTGACGAAGATCTGCATG 789550 >seq9 Length=1850997 Score = 93.3 bits (102), Expect = 4e-14 Identities = 114/152 (75%), Gaps = 4/152 (3%) Strand=Plus/Minus Query 68442 GTCATTCTAGACGGAAAAGCGTGCGGGTTTATGATAAGATCAGGAACCACTCCGTCTTTA 68501 ||||| | ||| |||| |||||||||||| ||||||||||| ||||| || || ||| || Sbjct 38109 GTCATACGAGATGGAATAGCGTGCGGGTTAATGATAAGATCGGGAACAACGCCCTCTCTA 38050 Query 68502 TCAAAGGGCATGTCTTCTTGCGATTTCACG--GCGCCGCATGTTCCTTTTTGCGCGGTAA 68559 || |||||||| | |||| || | ||| ||| ||||||||||| || | Sbjct 38049 GTGAAAGGCATGTCCTGTTGC-ATGT-ACGTAATACCGATGGTTCCTTTTTGTCCGTGAC 37992 Query 68560 ACGAGGCAAATTTATCACCCATTTCAGGTATC 68591 ||| |||||||| ||||| |||| ||| ||| Sbjct 37991 GCGACGCAAATTTGTCACCAATTTGAGGAATC 37960 >seq27 Length=788475 Score = 91.5 bits (100), Expect = 1e-13 Identities = 146/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 94798 CACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTC 94857 ||||||||||| || |||||||| | ||| |||||| | || || ||||| Sbjct 516438 CACCAAGTGCAGGGTGCTCTCCTTTTGAATGTTGTAATCGGAAAGGGTTCTGCCGTCCTC 516379 Query 94858 CAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATA 94917 || ||| ||||| ||||||| |||| ||| || || || |||||||| || ||||| | Sbjct 516378 CAACTGCTTTCCTGCAAAGATCAATCGTTGTTGGTCAGGTGGAATACCCTCCTTGTCCTG 516319 Query 94918 AATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTT 94977 || || | ||||||| | | ||| || | || || || | ||| || || || Sbjct 516318 GATCTTCGACTTGACGTTATCAATAGTATCTGACGATTCTACTTCTAACGTAATTGTCTT 516259 Query 94978 TCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 ||||| | || || |||||||| ||||| Sbjct 516258 ACCAGTCAAGGTCTTGACAAAGATTTGCAT 516229 Score = 84.2 bits (92), Expect = 2e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 94799 ACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCC 94858 ||||| || || |||||||||||||| | ||| || || || ||| | ||| || Sbjct 516209 ACCAAATGTAAGGTAGATTCCTTTTGGATGTTGTAGTCTGACAACGTGCGGCCATCTTCA 516150 Query 94859 AGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAA 94918 ||||| || || ||||||| | | || ||||| || |||||||| || || || | | Sbjct 516149 AGCTGCTTACCAGCAAAGATAAGACGCTGTTGATCAGGTGGAATACCCTCCTTATCTTGA 516090 Query 94919 ATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTT 94978 || || | ||||| | ||| || || | || || || | |||||||| ||| Sbjct 516089 ATCTTAGATTTGACATTGTCGATCGTATCCGATGACTCAACCTCCAAAGTGATGGTCTTT 516030 Query 94979 CCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 ||||| | || || || ||||| ||||| Sbjct 516029 CCAGTCAAGGTCTTAACGAAGATTTGCAT 516001 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448288370161800