Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monilinia_20aucupariae_20[genbank_20GCA_5F002162555.1_202017-05-31] 505 sequences; 54,948,206 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq8 233 2e-56 seq3 167 3e-36 >seq8 Length=1964072 Score = 233 bits (258), Expect = 2e-56 Identities = 1300/2064 (63%), Gaps = 45/2064 (2%) Strand=Plus/Minus Query 61995 GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGA 62054 || |||||||| || || || || | | ||||||| |||||||||||| || || | | Sbjct 142064 GTAAATTGAATAGGGGCCGAAGCAGCCATGGTACGTAAATAGTACATTCCGGTCTTCAAA 142005 Query 62055 CCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATA 62114 || || |||| || ||| |||||| || | ||| | ||||| || Sbjct 142004 CCCAGTTTCCAACCAGCAAAGTGCATAGATGTAATCTTGCCCATTGTAGGATCCTTCATG 141945 Query 62115 TGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATG 62174 || || ||||| ||||| ||||||||||||||| || | || |||||||| | | | Sbjct 141944 TGAATGTTCATCGATTGGGATTGATCGATGAAGGCACCACGATCGGCAGCCATCTGAACG 141885 Query 62175 ATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAGG 62234 || || || | ||||||||||| ||| || |||| ||| ||||| |||| | Sbjct 141884 ATTGTTCGCTGAGAAATTTCCCAAACAGTCTTGTAAAGGGCCTTGATATCAGCTGGGATA 141825 Query 62235 TTTGTA---TTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGATCTCATCATTC 62291 || | | || || |||||||| ||||| || || || | ||||| || | || | Sbjct 141824 TTAGGAATGTTTTGGATGGATCCGCCATCAGCGATGATACGGTTCTTCATGTTGTCCGAC 141765 Query 62292 CATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTCCA 62351 || | | ||| | | | || || ||||| || ||||| ||||||||| Sbjct 141764 CAAAGACCCATATCGACGAGGTCCTTGAGAAGCCATGGATTGACGACTTGGAATTCTCCA 141705 Query 62352 GACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACCGACTCATTATTTCCC 62411 | | || | |||| |||||| || || || ||||| | | ||||| || Sbjct 141704 GCAAGAACACGACGAGAGTAAATGTTTGAAGTGTAAGGTTCGAAACATTCATTGAAACCA 141645 Query 62412 AAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTAAGACCG 62471 | |||||| | || ||||| ||||| ||||| || | | | || | || ||| Sbjct 141644 AGAATTTGGGATGTGCTAGCAGTTGGCATGGGTGCAACGAGGAGAGAGTTGCGAACTCCG 141585 Query 62472 TATGTTCTGATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATCCGACGGTACAACNNNN 62531 | | |||| | || | || ||||||| ||| | ||| ||| ||| Sbjct 141584 TGTTGCTTGATGGATTGCTTCAAAGAGTCCCAATCCCACAAATCACTAGGTGTAACACCC 141525 Query 62532 NNNNNNNNNNNTTGTAGAATACCGTT----ACTGGCGTACGATCCTACATATGTATCGTA 62587 ||| || ||| || ||||| | | ||| |||| || || || Sbjct 141524 CACATGTCGTATTGGAGTTCACCCTTGGAGACTGGAG----AGCCTTCATAGGTTTCATA 141469 Query 62588 TGGTCCTTCCTTCTCAGCTAGTTC-ACAACTCGCCTCTAATGCACCGTAATAAATGGTTT 62646 ||| || || || || | || || | || || ||| | | || ||||| | Sbjct 141468 TGGACCAAGCTCCTTTGCAATCTCGACGGATGAGGTC-AAGGCAGCATGGTAGATGGTCT 141410 Query 62647 CGAAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTATCAAATGGATAATTTAAGAG-- 62704 |||| || | | || || | | ||||| | || |||||| | | |||| Sbjct 141409 CGAAAATTTGGATGTTGAGGTGCTTAGCTTCTGGAGAGTCGAATGGA-AGTCGGAGAGCC 141351 Query 62705 AATAAACGCGTCCGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGA 62764 || ||| || || || | || |||||||| | | ||||||||| || | ||| Sbjct 141350 AAGAAA-GCATCAGCAAGACCCTGAACACCGACAGCGATAGGTCGGTGACGGAAATTGCT 141292 Query 62765 GATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTTCTGAC 62824 | | |||||| ||| || ||||| || || | || || || || | |||||| || Sbjct 141291 CTTCTTGGCTTCTTGAACTGGGTAATAGTTGATGTTGATGATCTTGTTCAAATTTCTAAC 141232 Query 62825 AATTACTT---TGACCACATCCTTCAGTTTGAGAAAATCAAA---TCGCCCATCTATT-- 62876 || || | ||||| || | || ||| | |||||| | || | ||| || Sbjct 141231 AACAACCTGAGTGACC---TCGTGAAGCTTGTGGAAATCATAAGTTCCCTCATTCATGTT 141175 Query 62877 -ACAAACATGTTCAAGGCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGC 62935 ||||| | ||| || | ||| |||| |||||| || ||||||| | | | Sbjct 141174 GACAAAAGTTGGCAAAGCGATAGAAGCCAAGTTACAACAAGCAACCTCATCTGGCGCAGA 141115 Query 62936 ATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATAGTTCCTAAATTTTGTTGATT 62995 || | | ||||| ||||| | || | ||||| || | || | ||| || Sbjct 141114 GTACTCGACAATCTCTGTGCATAAGTTGGAGCTGCGAATAGTACCAAGGTTCTTTTGGTT 141055 Query 62996 ACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGA 63055 |||||| ||||| || ||||| || ||||| ||||| ||| | || || || | || | Sbjct 141054 ACTCTTCTTGTTGCATGCATCTTTGTAAAGCATGAAAGGATTTCCCGTCTCGGTTTGGGC 140995 Query 63056 TTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGATTTGTATCTCCTTTCT-- 63113 || | ||| | | ||| | | ||||||| || || ||| | |||| | Sbjct 140994 CTCGAGAATAGAGTACCAAAGCTTTTGAGCCTTGAT---AGTCTTGCGAC-CCTTGCCAG 140939 Query 63114 -CTT-TCGTATAGTGT-ATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAATCCA 63170 ||| ||||| | | | ||| | |||||||| || || |||||| |||| || Sbjct 140938 CCTTCTCGTA-ACTCTCATAGAGAGCCTCGAACTCTTCGCCATAAACATCTGCCAAACCC 140880 Query 63171 GGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAG 63230 |||||||| | || ||||| | | ||||||||| | | | || || |||||||| Sbjct 140879 GGACATTCGTTGGGGCACATAAGAGTCCACTCTCCATTCTTTTCAACACGCTTCATAAAT 140820 Query 63231 AGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTA 63290 |||||||||||||| | || || ||||| | | | | ||| || || || | Sbjct 140819 AGATCAGGAATCCACAAGGCGTAGAAGAGATCACGTGCACGAACTTCTTCCTTGCCATGA 140760 Query 63291 TTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCC 63350 ||||| ||||| || ||| | | || |||| |||||| ||||| | ||| || || Sbjct 140759 TTCTTGCGCAGATCAAGAAACTCGAAAACGTCAGCATGCCATGGTTCAAGGTAAATAGCG 140700 Query 63351 ATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACT 63410 | | | ||||| || || || || || ||||| | ||||| |||||||| || ||||| Sbjct 140699 AAAGCACCAGGTCGCTTATTACCACCTTGATCAACATATCTGGCGGTGTTGTTGAAAACT 140640 Query 63411 CTCAACATTGGAATAATACCGTTTGATATACCATTGGTACCGGAGATATAGCTTCCACTG 63470 | | ||| || | ||| ||||| || | || ||||| |||| ||| || ||| | Sbjct 140639 CGGAGCATAGGGACAATGCCGTTGGAGTTTCCGTTGGTGCCGGCGATGTATGCACCAGTA 140580 Query 63471 GCACGAATATTACTAA--TTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGC 63528 ||||| || | || ||| ||||| || || || || | || || || | || | Sbjct 140579 GCACGGATTCTGTGAACGTTG--AGACCAATACCACCGGCATTCTTCGAAATCATGGCAC 140522 Query 63529 ATCGTTTTAACGTGTCATAGATACCCTCTATGCTATCATCGATCATGTTAAGTAGAAAAC 63588 | || || ||||| || ||||| || || || || || |||||| | || || | Sbjct 140521 AAATCTTCAAAGTGTCGTAAATACCATCAATACTGTCCTCCTTCATGTCGATGAGGAAGC 140462 Query 63589 AGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAA 63648 | || | ||| | |||||||||| || | || || || || || || | Sbjct 140461 ATGATGAAAGTTGTGCTTGTGGAGTTCCCGCAGAGAAGAGTGTCGGGGAGGCATGGGTGA 140402 Query 63649 ACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAA 63708 | | || | || | | ||||| ||||| ||||| || ||||| ||||| Sbjct 140401 AGTACTTGTTTGACATCAAGTTGTATGTCTCGATAGCACTCTCAATATCATCACCATGAA 140342 Query 63709 TTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTT 63768 | || || || |||||||| | ||| || || || | ||| | | ||| | | Sbjct 140341 TACCAACGGCAACACGCATGATCATTTGTTGTGGACGTTCTGCAACTTTGCCATCGAGGC 140282 Query 63769 TCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTT 63828 | | ||| ||| | || | ||| || || || || || | ||| |||||||| | Sbjct 140281 GTAGAAGGTATGATCTCTCGAGAGTCTTGAACCCGAAGTATTGGTAGTTGAAGTCTCGGT 140222 Query 63829 CGTAAATAATAACCGAGTTGAGTTTATCCTTATATTTGTTAACTATATCCATGGTGATAC 63888 | || | |||| | |||||||||| |||| || | | | || || | | | | Sbjct 140221 CATAGACAATAGCAGAGTTGAGTTCCTCCTCATGTCTCATGAC-GCATTCGTAAGTTTCC 140163 Query 63889 TTG-AAATAATCGGAGAATGTTTCCCATTTTTAGGATTAACATAGTTGAATAAATCCTCC 63947 ||| ||| || ||||| | | |||||| | || || || | | ||||||| Sbjct 140162 TTGCTAATCATAGGAGATGGGGTGCCATTTCTTGGGTTTGTGTATTGGTATAAATCGCGG 140103 Query 63948 ATCACTTCACTAAATAGtttttttGTTTCCTTGTGTAGATTTGATACGGCTATTCTGGCG 64007 || || | |||| |||| || |||| ||||| || || || || || || | || Sbjct 140102 ATAACGTGGGAAAATTGTTTCTTGGTTTGTTTGTGGAGGTTCGAGACAGCAATACGAGCA 140043 Query 64008 GCTAGAATGGCATAATCCGGATGT 64031 ||||||||||||||||| |||||| Sbjct 140042 GCTAGAATGGCATAATCTGGATGT 140019 >seq3 Length=2715537 Score = 167 bits (184), Expect = 3e-36 Identities = 349/514 (68%), Gaps = 7/514 (1%) Strand=Plus/Plus Query 33013 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTT 33072 |||||||| ||||| || | || |||||||| || ||||| || ||||||| || || Sbjct 2405376 TTTTGGTAATCACCAACTCTCTTCTCGAAAAAGTTGGTTTTGCCGGCCAATGAGATGTTC 2405435 Query 33073 TCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAATC 33132 ||||||||||| || || |||| | | |||| ||| | ||||| | | Sbjct 2405436 TCCATGAAATCGAATGGGTTGGCAGACCTGTAAAATTTCTCGTTGCCCAAAGCGATGAGA 2405495 Query 33133 AATCTATCCGCGACGAATTCTATATATGTTTTCATCAT-TTCACAATTCATTCCTATAAG 33191 | | ||| || ||||| || || ||| ||||| | ||| | ||||| |||| || Sbjct 2405496 AGACGATCAGCAACGAACTCGATGTATTGCTTCATGAGATTCGCG-TTCATGCCTAAGAG 2405554 Query 33192 TTTAACTGGAAGAGCCGCAGTAAGAAATTCTTGTTCAATGGATACCGCATCTGTTATAAT 33251 | |||||||||| | || | |||||||| || || || || || || || | Sbjct 2405555 AGCACATGGAAGAGCCTCGGTCAAGAATTCTTGCTCGATTTCGACGGCTTCAGTGATGAC 2405614 Query 33252 AGATCTAACGGTTT-CTTCACTCGGTGGATGCAATAAATGTTTAAACATCAAACATGCGA 33310 | | ||||| || ||| | || || ||| | ||| ||| | | ||||||| Sbjct 2405615 ATCTTGAACGGCTTGCTTGGATGGGCGG-TGCTTGAGATGGGAAAAGAGGAGGCATGCGA 2405673 Query 33311 AATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCA 33370 | ||| ||| ||||| ||||| | || ||||||||||| || || ||||||| || Sbjct 2405674 AGTCGGTGTGGAGACCTTCGTCACGGGAGATGAGTTCGTTGGAGAAAGTAAGTCCGGCCA 2405733 Query 33371 TTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCAGAAAAGAAGATTCCTT 33430 | || |||||||| || ||||| || || || ||||| ||||| || ||||| || |||| Sbjct 2405734 TGAGACCACGCTTCTTGAGCCAGAAGATAGATGCGAAGGATCCGGAGAAGAAAATACCTT 2405793 Query 33431 CTACTGCAGCAAAGGCAATAAGTCTCTCTCCATA---ACCGGCGCTGTCATGTATCCACT 33487 | || ||||| || || | || | | || | | | |||| || ||||||| Sbjct 2405794 CAACGGCAGCGAATGCGACGAGACGTTGAGCAAAGGTAGAGTTCTTGTCTTGAATCCACT 2405853 Query 33488 TTTGAGCCCAATCGGCCTTCTTTTTTACACAAGG 33521 | |||||| |||||||||||||| | ||||| Sbjct 2405854 TGACAGCCCAGTCGGCCTTCTTTTTAATGCAAGG 2405887 Score = 109 bits (120), Expect = 7e-19 Identities = 227/334 (68%), Gaps = 7/334 (2%) Strand=Plus/Plus Query 33526 GTTTCTATGGCATTAAAGAGATA-Gtttttt-tCATTACTATCTTTAACATAAGTATCGA 33583 || || || || || ||||| || || |||| | || || | || | ||| || |||| Sbjct 2405951 GTGTCAATAGCGTTGAAGAGGTATGTCTTTTGTGCTTGCT--CCTTGATATATGTGTCGA 2406008 Query 33584 TCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAAC 33643 | | |||| || |||| ||||||||||| || || || || || |||||||| | Sbjct 2406009 TGAGAAGAGAGTATGTTTCAGAATGAATGTTCTCCATCATGATTTGGAAACCGTAGAAGC 2406068 Query 33644 ATCTAGCCTCGGTAATCTGTACTTCTGTACAAAATCGTTCCGCCAAATTTTCATTCACTA 33703 |||| ||||| | || || ||||| || ||||| || |||| || ||||| || | Sbjct 2406069 ATCTTGCCTCTGGGATTTGAACTTCACCACTGAATCGCTCTACCAAGTTCTCATTGACAA 2406128 Query 33704 TTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTG 33763 |||||||| ||||| || || || | || || || || || || || Sbjct 2406129 TTCCGTCAGATGCTGCGAAGAATGCGAGAACGTGCGAGATGAAGTAGCGCTCATCATCAT 2406188 Query 33764 TTAGT---TTATTCCAATCATTGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAA 33820 | ||| || ||||| || | | ||| || || | ||| | ||||| | ||||| | Sbjct 2406189 TGAGTCTGTTGTTCCAGTCGTGAAGATCCTTTGACAAATCGATCTCTTCTGCGGTCCAGA 2406248 Query 33821 ATGATGCCTCTGCCTTTTTATACATGTTCCAGAT 33854 | |||||||||||||| || ||||| | |||||| Sbjct 2406249 AAGATGCCTCTGCCTTCTTGTACATCTGCCAGAT 2406282 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622943267645800