Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Monilinia_20aucupariae_20[genbank_20GCA_5F002162555.1_202017-05-31]
505 sequences; 54,948,206 total letters
Query= NC_007151.1
Length=149622
Score E
Sequences producing significant alignments: (Bits) Value
seq27 98.7 1e-15
seq3 93.3 4e-14
>seq27
Length=788475
Score = 98.7 bits (108), Expect = 1e-15
Identities = 152/217 (70%), Gaps = 0/217 (0%)
Strand=Plus/Plus
Query 26779 TTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAACGACACCATCG 26838
|||| || || | || ||||| | |||||| | ||| | ||||| ||||||||||
Sbjct 515783 TTGTCAAGACCCTCACCGGAAAGACCATCACCCTTGAAGTCGAATCTTCTGACACCATCG 515842
Query 26839 AGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAACAAAGACTCA 26898
| | ||||| |||||| || || || || || || ||||||||||| | | |
Sbjct 515843 ATAATGTCAAGTCAAAGATCCAAGATAAGGAGGGTATCCCACCCGATCAACAGCGTTTGA 515902
Query 26899 TTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAACATTCAAAAAG 26958
||| || ||| || ||||| || |||| | | | | || |||||| || ||||| || |
Sbjct 515903 TTTTCGCCGGAAAGCAACTTGAGGATGGTCGTACCCTCTCCGACTACAATATTCAGAAGG 515962
Query 26959 AATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995
| || || | || |||||||||||||| | || ||
Sbjct 515963 AGTCGACCCTTCACTTGGTCCTGAGACTTCGTGGTGG 515999
Score = 91.5 bits (100), Expect = 1e-13
Identities = 133/188 (71%), Gaps = 0/188 (0%)
Strand=Plus/Plus
Query 26793 ACTGGAAAATCGATCACCATCGAATTAGAATCAAACGACACCATCGAGCAAGTCAAACAA 26852
||||| || | |||||| | || | ||||| | ||| ||||| || | ||||| |
Sbjct 515514 ACTGGCAAGACTATCACCCTTGAGGTCGAATCCAGCGATACCATTGACAACGTCAAGTCA 515573
Query 26853 AAGATTACCGACAAAGAAGGGATACCTCCCGATCAACAAAGACTCATTTACGGCGGCAAA 26912
||||| || || || || || || ||||| ||||| | | |||| || ||| ||
Sbjct 515574 AAGATCCAAGATAAGGAGGGAATTCCCCCCGACCAACAGCGTTTGATTTTCGCCGGAAAG 515633
Query 26913 CAACTCGAAGATGATAGAAACGTCAGCGACTATAACATTCAAAAAGAATCTACTATCCAT 26972
||||| || |||| | | | | | || ||||| ||||||||||| || ||||| |||||
Sbjct 515634 CAACTTGAGGATGGTCGCACCTTGAGTGACTACAACATTCAAAAGGAGTCTACGCTCCAT 515693
Query 26973 CTGGTCCT 26980
|| || ||
Sbjct 515694 CTTGTGCT 515701
>seq3
Length=2715537
Score = 93.3 bits (102), Expect = 4e-14
Identities = 241/364 (66%), Gaps = 19/364 (5%)
Strand=Plus/Plus
Query 119645 GTACTCGCCCACACGTTTTTCaaaaaaaTTAGTCTTGCCCTCAAGAGATATGTTATTCAT 119704
||| || || || | || || ||||| || || ||||| | | || ||||| | |||
Sbjct 2405381 GTAATCACCAACTCTCTTCTCGAAAAAGTTGGTTTTGCCGGCCAATGAGATGTTCTCCAT 2405440
Query 119705 AAACTCGAAAGGATTTGCAGTGTTGAAATGCTTGTCGTAGCCCAACTCGAACAACAGTCG 119764
|| ||||| || || |||| || || || |||| |||||| ||| | || ||
Sbjct 2405441 GAAATCGAATGGGTTGGCAGACCTGTAAAATTTCTCGTTGCCCAAAGCGATGAGAAGACG 2405500
Query 119765 ATCTGCCACAAACTCGATGTATTCGCACATG-GATTGCGAATTCATGCCCAACATAGCGA 119823
||| || || ||||||||||||| |||| |||| || |||||||| || | |||
Sbjct 2405501 ATCAGCAACGAACTCGATGTATTGCTTCATGAGATT-CGCGTTCATGCCTAAGAGAGCAC 2405559
Query 119824 CCGGTAAAGCATTGGTAAAGAAATCCTTTTCAATGTCGACCGCTTC--TACAAACATACT 119881
|| | ||| | ||| ||||| || | || || ||||| ||||| | |||| |
Sbjct 2405560 ATGGAAGAGCCTCGGTCAAGAATTCTTGCTCGATTTCGACGGCTTCAGTGATGACATCTT 2405619
Query 119882 CAACACCTTGGTCTTGGAGAGCTTGTTCTT--TTCGGGAATATATTTATTGTAGTATAGA 119939
||| |||| |||||| | || ||| ||||| || ||
Sbjct 2405620 GAACGGCTTG--CTTGGATGGGCGGTGCTTGAGATGGGAA-----------AAGAGGAGG 2405666
Query 119940 CAAGCAAAGTCGGTGTGTAGTCCTTCGTCTCTGGAAATGAGTTCGTTGCTGTAAGTCAAG 119999
|| || ||||||||||| || |||||||| | ||| |||||||||||| | |||| |
Sbjct 2405667 CATGCGAAGTCGGTGTGGAGACCTTCGTCACGGGAGATGAGTTCGTTGGAGAAAGTAAGT 2405726
Query 120000 CCGG 120003
||||
Sbjct 2405727 CCGG 2405730
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 478659378443600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |