Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monilinia_20aucupariae_20[genbank_20GCA_5F002162555.1_202017-05-31] 505 sequences; 54,948,206 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq27 98.7 1e-15 seq3 93.3 4e-14 >seq27 Length=788475 Score = 98.7 bits (108), Expect = 1e-15 Identities = 152/217 (70%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 26779 TTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAACGACACCATCG 26838 |||| || || | || ||||| | |||||| | ||| | ||||| |||||||||| Sbjct 515783 TTGTCAAGACCCTCACCGGAAAGACCATCACCCTTGAAGTCGAATCTTCTGACACCATCG 515842 Query 26839 AGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAACAAAGACTCA 26898 | | ||||| |||||| || || || || || || ||||||||||| | | | Sbjct 515843 ATAATGTCAAGTCAAAGATCCAAGATAAGGAGGGTATCCCACCCGATCAACAGCGTTTGA 515902 Query 26899 TTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAACATTCAAAAAG 26958 ||| || ||| || ||||| || |||| | | | | || |||||| || ||||| || | Sbjct 515903 TTTTCGCCGGAAAGCAACTTGAGGATGGTCGTACCCTCTCCGACTACAATATTCAGAAGG 515962 Query 26959 AATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995 | || || | || |||||||||||||| | || || Sbjct 515963 AGTCGACCCTTCACTTGGTCCTGAGACTTCGTGGTGG 515999 Score = 91.5 bits (100), Expect = 1e-13 Identities = 133/188 (71%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 26793 ACTGGAAAATCGATCACCATCGAATTAGAATCAAACGACACCATCGAGCAAGTCAAACAA 26852 ||||| || | |||||| | || | ||||| | ||| ||||| || | ||||| | Sbjct 515514 ACTGGCAAGACTATCACCCTTGAGGTCGAATCCAGCGATACCATTGACAACGTCAAGTCA 515573 Query 26853 AAGATTACCGACAAAGAAGGGATACCTCCCGATCAACAAAGACTCATTTACGGCGGCAAA 26912 ||||| || || || || || || ||||| ||||| | | |||| || ||| || Sbjct 515574 AAGATCCAAGATAAGGAGGGAATTCCCCCCGACCAACAGCGTTTGATTTTCGCCGGAAAG 515633 Query 26913 CAACTCGAAGATGATAGAAACGTCAGCGACTATAACATTCAAAAAGAATCTACTATCCAT 26972 ||||| || |||| | | | | | || ||||| ||||||||||| || ||||| ||||| Sbjct 515634 CAACTTGAGGATGGTCGCACCTTGAGTGACTACAACATTCAAAAGGAGTCTACGCTCCAT 515693 Query 26973 CTGGTCCT 26980 || || || Sbjct 515694 CTTGTGCT 515701 >seq3 Length=2715537 Score = 93.3 bits (102), Expect = 4e-14 Identities = 241/364 (66%), Gaps = 19/364 (5%) Strand=Plus/Plus Query 119645 GTACTCGCCCACACGTTTTTCaaaaaaaTTAGTCTTGCCCTCAAGAGATATGTTATTCAT 119704 ||| || || || | || || ||||| || || ||||| | | || ||||| | ||| Sbjct 2405381 GTAATCACCAACTCTCTTCTCGAAAAAGTTGGTTTTGCCGGCCAATGAGATGTTCTCCAT 2405440 Query 119705 AAACTCGAAAGGATTTGCAGTGTTGAAATGCTTGTCGTAGCCCAACTCGAACAACAGTCG 119764 || ||||| || || |||| || || || |||| |||||| ||| | || || Sbjct 2405441 GAAATCGAATGGGTTGGCAGACCTGTAAAATTTCTCGTTGCCCAAAGCGATGAGAAGACG 2405500 Query 119765 ATCTGCCACAAACTCGATGTATTCGCACATG-GATTGCGAATTCATGCCCAACATAGCGA 119823 ||| || || ||||||||||||| |||| |||| || |||||||| || | ||| Sbjct 2405501 ATCAGCAACGAACTCGATGTATTGCTTCATGAGATT-CGCGTTCATGCCTAAGAGAGCAC 2405559 Query 119824 CCGGTAAAGCATTGGTAAAGAAATCCTTTTCAATGTCGACCGCTTC--TACAAACATACT 119881 || | ||| | ||| ||||| || | || || ||||| ||||| | |||| | Sbjct 2405560 ATGGAAGAGCCTCGGTCAAGAATTCTTGCTCGATTTCGACGGCTTCAGTGATGACATCTT 2405619 Query 119882 CAACACCTTGGTCTTGGAGAGCTTGTTCTT--TTCGGGAATATATTTATTGTAGTATAGA 119939 ||| |||| |||||| | || ||| ||||| || || Sbjct 2405620 GAACGGCTTG--CTTGGATGGGCGGTGCTTGAGATGGGAA-----------AAGAGGAGG 2405666 Query 119940 CAAGCAAAGTCGGTGTGTAGTCCTTCGTCTCTGGAAATGAGTTCGTTGCTGTAAGTCAAG 119999 || || ||||||||||| || |||||||| | ||| |||||||||||| | |||| | Sbjct 2405667 CATGCGAAGTCGGTGTGGAGACCTTCGTCACGGGAGATGAGTTCGTTGGAGAAAGTAAGT 2405726 Query 120000 CCGG 120003 |||| Sbjct 2405727 CCGG 2405730 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478659378443600