Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Monilinia_20aucupariae_20[genbank_20GCA_5F002162555.1_202017-05-31]
505 sequences; 54,948,206 total letters
Query= NC_007921.1
Length=147544
Score E
Sequences producing significant alignments: (Bits) Value
seq17 129 6e-25
seq27 105 6e-18
seq1 84.2 2e-11
>seq17
Length=1064257
Score = 129 bits (142), Expect = 6e-25
Identities = 167/231 (72%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
||||| || | ||||| ||| || || | ||| ||||||||||| |||||||| |||
Sbjct 789777 CCACCACGGAGACGCAACACCAAGTGAAGGGTGGACTCCTTTTGGATGTTGTAGTCGGAA 789718
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| || || ||||| || ||||| || ||| |||| || ||||| ||||| || |||
Sbjct 789717 AGAGTACGGCCATCCTCAAGTTGCTTTCCAGCGAAGATCAATCGCTGTTGGTCGGGTGGG 789658
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187
||||| || ||||| ||| || ||||| | || | || || | ||||| |
Sbjct 789657 ATTCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATGGTGTCCGAAGACTCAACC 789598
Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATGACT 131238
|||| ||| | |||||| || || || || || ||||| ||||||||||||
Sbjct 789597 TCGAGGGTGATGGTTTTGCCCGTAAGGGTCTTGACGAAGATCTGCATGACT 789547
>seq27
Length=788475
Score = 105 bits (116), Expect = 6e-18
Identities = 130/178 (73%), Gaps = 0/178 (0%)
Strand=Plus/Minus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
||||| || | || ||||| | ||| | || |||||||||||||||||||| || |||
Sbjct 515716 CCACCACGAAGGCGGAGCACAAGATGGAGCGTAGACTCCTTTTGAATGTTGTAGTCACTC 515657
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| |||||| ||||| || ||||| || ||| | || |||||||| ||||| || ||
Sbjct 515656 AAGGTGCGACCATCCTCAAGTTGCTTTCCGGCGAAAATCAAACGCTGTTGGTCGGGGGGA 515597
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGA 131185
||||| || || || ||| || ||||| | || | |||||| |||| ||||
Sbjct 515596 ATTCCCTCCTTATCTTGGATCTTTGACTTGACGTTGTCAATGGTATCGCTGGATTCGA 515539
Score = 98.7 bits (108), Expect = 9e-16
Identities = 158/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
||||| || | ||| ||||| || || | ||| ||||||||||||||||||||||
Sbjct 516455 CCACCACGAAGACGGAGCACCAAGTGCAGGGTGCTCTCCTTTTGAATGTTGTAATCGGAA 516396
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| ||| | |||||| | |||||| ||||| |||| || || || ||||| || ||
Sbjct 516395 AGGGTTCTGCCGTCCTCCAACTGCTTTCCTGCAAAGATCAATCGTTGTTGGTCAGGTGGA 516336
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187
|| || || ||||| ||| ||| ||||| | || | |||||| | || || |
Sbjct 516335 ATACCCTCCTTGTCCTGGATCTTCGACTTGACGTTATCAATAGTATCTGACGATTCTACT 516276
Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|| | |||| || ||||| || | || || || || || |||||
Sbjct 516275 TCTAACGTAATTGTCTTACCAGTCAAGGTCTTGACAAAGATTTGCAT 516229
Score = 82.4 bits (90), Expect = 7e-11
Identities = 147/215 (68%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
||||| || | | ||| || || || | |||||||||||| ||||| ||||| |||
Sbjct 515999 CCACCACGAAGTCTCAGGACCAAGTGAAGGGTCGACTCCTTCTGAATATTGTAGTCGGAG 515940
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| ||| || ||||| || ||||| || ||| | || |||||||| || || || |||
Sbjct 515939 AGGGTACGACCATCCTCAAGTTGCTTTCCGGCGAAAATCAAACGCTGTTGATCGGGTGGG 515880
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187
|| || || || || ||| || ||||| | || | || || | || ||||
Sbjct 515879 ATACCCTCCTTATCTTGGATCTTTGACTTGACATTATCGATGGTGTCAGAAGATTCGACT 515820
Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTAC 131222
|| | ||| | ||| || ||||| || || || ||
Sbjct 515819 TCAAGGGTGATGGTCTTTCCGGTGAGGGTCTTGAC 515785
>seq1
Length=6243313
Score = 84.2 bits (92), Expect = 2e-11
Identities = 127/181 (70%), Gaps = 0/181 (0%)
Strand=Plus/Minus
Query 131045 CCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGA 131104
||||||| ||||||||||| | || || |||||| || ||||| || ||| |||
Sbjct 2454776 CCTTTTGGATGTTGTAATCTGAGAGAGTACGTCCGTCCTCAAGTTGCTTTCCAGCGAAGA 2454717
Query 131105 TTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCT 131164
| ||||| || || || ||||| ||||| || ||||| ||| || ||||| | |
Sbjct 2454716 TCAAACGTTGTTGATCGGGAGGAATTCCCTCCTTGTCCTGGATCTTGGACTTGACATTGT 2454657
Query 131165 CCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGA 131224
| | || || | |||||||| || | ||| | ||| || || || || || || ||||
Sbjct 2454656 CAATGGTGTCAGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTAAGGGTCTTGACGA 2454597
Query 131225 A 131225
|
Sbjct 2454596 A 2454596
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 472009820419200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |