Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monilinia_20aucupariae_20[genbank_20GCA_5F002162555.1_202017-05-31] 505 sequences; 54,948,206 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq8 235 7e-57 seq3 122 1e-22 >seq8 Length=1964072 Score = 235 bits (260), Expect = 7e-57 Identities = 1302/2066 (63%), Gaps = 49/2066 (2%) Strand=Plus/Minus Query 61850 GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGA 61909 || |||||||| || || || || | | ||||||| |||||||||||| || || | | Sbjct 142064 GTAAATTGAATAGGGGCCGAAGCAGCCATGGTACGTAAATAGTACATTCCGGTCTTCAAA 142005 Query 61910 CCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATA 61969 || || |||| || ||| |||||| || | ||| | ||||| || Sbjct 142004 CCCAGTTTCCAACCAGCAAAGTGCATAGATGTAATCTTGCCCATTGTAGGATCCTTCATG 141945 Query 61970 TGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATA 62029 || || ||||| ||||| ||||||||||||||| || | || |||||||| | | Sbjct 141944 TGAATGTTCATCGATTGGGATTGATCGATGAAGGCACCACGATCGGCAGCCATCTGAACG 141885 Query 62030 ATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAGG 62089 || || || | ||||||||||| ||| || |||| ||| ||||| |||| | Sbjct 141884 ATTGTTCGCTGAGAAATTTCCCAAACAGTCTTGTAAAGGGCCTTGATATCAGCTGGGATA 141825 Query 62090 TTTGTA---TTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGATCTCATCATTC 62146 || | | || || |||||||| ||||| || || || | ||||| || | || | Sbjct 141824 TTAGGAATGTTTTGGATGGATCCGCCATCAGCGATGATACGGTTCTTCATGTTGTCCGAC 141765 Query 62147 CATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTCCA 62206 || | | ||| | | | || || ||||| || ||||| ||||||||| Sbjct 141764 CAAAGACCCATATCGACGAGGTCCTTGAGAAGCCATGGATTGACGACTTGGAATTCTCCA 141705 Query 62207 GACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAGACTCATTATTTCCC 62266 | | || | |||| |||||| || || || ||||| | | | ||||| || Sbjct 141704 GCAAGAACACGACGAGAGTAAATGTTTGAAGTGTAAGGTTCGAAACATTCATTGAAACCA 141645 Query 62267 AAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTAAGACCG 62326 | |||||| | || ||||| ||||| ||||| || | | | || | || ||| Sbjct 141644 AGAATTTGGGATGTGCTAGCAGTTGGCATGGGTGCAACGAGGAGAGAGTTGCGAACTCCG 141585 Query 62327 TATGTTCTGATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATCCGACGGTACAACNNNN 62386 | | |||| | || | || ||||||| ||| | ||| ||| ||| Sbjct 141584 TGTTGCTTGATGGATTGCTTCAAAGAGTCCCAATCCCACAAATCACTAGGTGTAACACCC 141525 Query 62387 NNNNNNNNNNNTTGTAGAATACCGTT----ACTGGCGTACGATCCTACATATGTATCGTA 62442 ||| || ||| || ||||| | | ||| |||| || || || Sbjct 141524 CACATGTCGTATTGGAGTTCACCCTTGGAGACTGGAG----AGCCTTCATAGGTTTCATA 141469 Query 62443 TGGTCCTTCCTTCTCAGCTAGTTC-ACAACTCGCCTCTAATGCACCGTAATAAATGGTTT 62501 ||| || || || || | || || | || || ||| | | || ||||| | Sbjct 141468 TGGACCAAGCTCCTTTGCAATCTCGACGGATGAGGTC-AAGGCAGCATGGTAGATGGTCT 141410 Query 62502 CGAAGATCTTCTTATTTAGATCTTGCGCTTCCAGGCTATCAAATGGATAATTTAAGAG-- 62559 |||| || | | || || | | ||||| | || |||||| | | |||| Sbjct 141409 CGAAAATTTGGATGTTGAGGTGCTTAGCTTCTGGAGAGTCGAATGGA-AGTCGGAGAGCC 141351 Query 62560 AATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGA 62619 || ||| || || || | || |||||||| | | ||||||||| || | ||| Sbjct 141350 AAGAAA-GCATCAGCAAGACCCTGAACACCGACAGCGATAGGTCGGTGACGGAAATTGCT 141292 Query 62620 GATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTTCTGAC 62679 | | |||||| ||| || ||||| || || | || || || || | |||||| || Sbjct 141291 CTTCTTGGCTTCTTGAACTGGGTAATAGTTGATGTTGATGATCTTGTTCAAATTTCTAAC 141232 Query 62680 AATTACTT---TGACCACATCCTTCAGTTTGAGAAAATCAAA---TCGCCCATCTATT-- 62731 || || | ||||| || | || ||| | |||||| | || | ||| || Sbjct 141231 AACAACCTGAGTGACC---TCGTGAAGCTTGTGGAAATCATAAGTTCCCTCATTCATGTT 141175 Query 62732 -ACAAACATGTTCAATGCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGC 62790 ||||| | ||| || | ||| |||| |||||| || ||||||| | | | Sbjct 141174 GACAAAAGTTGGCAAAGCGATAGAAGCCAAGTTACAACAAGCAACCTCATCTGGCGCAGA 141115 Query 62791 ATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATT 62850 || | | ||||| ||||| | || | || || || | || | ||| || Sbjct 141114 GTACTCGACAATCTCTGTGCATAAGTTGGAGCTGCGAATAGTACCAAGGTTCTTTTGGTT 141055 Query 62851 ACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGA 62910 |||||| ||||| || ||||| || ||||| ||||| ||| | || || || | || | Sbjct 141054 ACTCTTCTTGTTGCATGCATCTTTGTAAAGCATGAAAGGATTTCCCGTCTCGGTTTGGGC 140995 Query 62911 TTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGATTTGTATCTCTTTTCT-- 62968 || | ||| | | ||| | | ||||||| || || ||| | ||| | Sbjct 140994 CTCGAGAATAGAGTACCAAAGCTTTTGAGCCTTGAT---AGTCTTGCGACCCTTGCCAGC 140938 Query 62969 CTT-TCGTATAGTGT-ATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAGTCCAG 63026 ||| ||||| | | | ||| | |||||||| || || |||||| ||| || | Sbjct 140937 CTTCTCGTA-ACTCTCATAGAGAGCCTCGAACTCTTCGCCATAAACATCTGCCAAACCCG 140879 Query 63027 GACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGA 63086 ||||||| | || ||||| | | ||||||||| | | | || || |||||||| | Sbjct 140878 GACATTCGTTGGGGCACATAAGAGTCCACTCTCCATTCTTTTCAACACGCTTCATAAATA 140819 Query 63087 GATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTAT 63146 ||||||||||||| | || || ||||| | | | | ||| || || || || Sbjct 140818 GATCAGGAATCCACAAGGCGTAGAAGAGATCACGTGCACGAACTTCTTCCTTGCCATGAT 140759 Query 63147 TCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCA 63206 |||| ||||| || ||| | | || |||| |||||| ||||| | ||| || || | Sbjct 140758 TCTTGCGCAGATCAAGAAACTCGAAAACGTCAGCATGCCATGGTTCAAGGTAAATAGCGA 140699 Query 63207 TAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTC 63266 | | ||||| || || || || || ||||| | ||||| |||||||| || |||||| Sbjct 140698 AAGCACCAGGTCGCTTATTACCACCTTGATCAACATATCTGGCGGTGTTGTTGAAAACTC 140639 Query 63267 TCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCTGAGATATAGCTTCCACTGG 63326 | ||| || | ||| || ||||| | || ||||| || | ||| || ||| | | Sbjct 140638 GGAGCATAGGGACAATGCCGTTGGAGTTTCCGTTGGTGCCGGCGATGTATGCACCAGTAG 140579 Query 63327 CACGAATATTACTAA--TTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCA 63384 |||| || | || ||| ||||| || || || || | || || || | || || Sbjct 140578 CACGGATTCTGTGAACGTTG--AGACCAATACCACCGGCATTCTTCGAAATCATGGCACA 140521 Query 63385 TCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACA 63444 || || || || || || || || ||||| || ||| |||||| | || || || Sbjct 140520 AATCTTCAAAGTGTCGTAAATACCATCAATACTGTCCTCCTTCATGTCGATGAGGAAGCA 140461 Query 63445 GCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGAGTAAA 63504 || | ||| | |||||||||| || | || || || || || || || Sbjct 140460 TGATGAAAGTTGTGCTTGTGGAGTTCCCGCAGAGAAGAGTGTCGGGGAGGCATGGGTGAA 140401 Query 63505 CCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAAT 63564 | || | || | | ||||| ||||| ||||| || ||||| |||||| Sbjct 140400 GTACTTGTTTGACATCAAGTTGTATGTCTCGATAGCACTCTCAATATCATCACCATGAAT 140341 Query 63565 TCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTT 63624 || || || |||||||| | ||| || || || | ||| | | ||| | | Sbjct 140340 ACCAACGGCAACACGCATGATCATTTGTTGTGGACGTTCTGCAACTTTGCCATCGAGGCG 140281 Query 63625 CAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTC 63684 | | ||| ||| | || | ||| || || || || || | ||| |||||||| || Sbjct 140280 TAGAAGGTATGATCTCTCGAGAGTCTTGAACCCGAAGTATTGGTAGTTGAAGTCTCGGTC 140221 Query 63685 GTAAATAATAACCGAGTTGAGTTTATCCTTATATTTGTTAACTACATCCATGGTAA---T 63741 || | |||| | |||||||||| |||| || | | | || ||| | |||| | Sbjct 140220 ATAGACAATAGCAGAGTTGAGTTCCTCCTCATGTCTCATGAC-GCAT---TCGTAAGTTT 140165 Query 63742 ACTTG-AAATAATAGGAAAATGTTTCCCATTTTTAGGATTGACATAGTTGAATAAATCCT 63800 |||| ||| |||||| | | | |||||| | || || || | | ||||||| Sbjct 140164 CCTTGCTAATCATAGGAGATGGGGTGCCATTTCTTGGGTTTGTGTATTGGTATAAATCGC 140105 Query 63801 CCATCACTTCACTAAATAGtttttttGTTTCTTTGTGTAGATTTGATACGGCTATTCTAG 63860 || || | |||| |||| || |||| |||||| || || || || || || | || Sbjct 140104 GGATAACGTGGGAAAATTGTTTCTTGGTTTGTTTGTGGAGGTTCGAGACAGCAATACGAG 140045 Query 63861 CGGCTAGAATGGCATAATCCGGATGT 63886 | ||||||||||||||||| |||||| Sbjct 140044 CAGCTAGAATGGCATAATCTGGATGT 140019 >seq3 Length=2715537 Score = 122 bits (134), Expect = 1e-22 Identities = 230/334 (69%), Gaps = 7/334 (2%) Strand=Plus/Plus Query 32883 GTCTCTATAGCATTAAAGAGATA-Gtttttt-tCATTACTATCTTTAACATATGTATCAA 32940 || || ||||| || ||||| || || |||| | || || | || | |||||| || | Sbjct 2405951 GTGTCAATAGCGTTGAAGAGGTATGTCTTTTGTGCTTGCT--CCTTGATATATGTGTCGA 2406008 Query 32941 TCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAGC 33000 | | |||| || |||| ||||||||||| || || ||||| || |||||||||| Sbjct 2406009 TGAGAAGAGAGTATGTTTCAGAATGAATGTTCTCCATCATGATTTGGAAACCGTAGAAGC 2406068 Query 33001 ATCTAGCCTCGGTAATCTGTACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTA 33060 |||| ||||| | || || ||||| || ||||| ||| | || || ||||| || | Sbjct 2406069 ATCTTGCCTCTGGGATTTGAACTTCACCACTGAATCGCTCTACCAAGTTCTCATTGACAA 2406128 Query 33061 TTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTG 33120 |||||||| ||||| || || || | || || || || || || || Sbjct 2406129 TTCCGTCAGATGCTGCGAAGAATGCGAGAACGTGCGAGATGAAGTAGCGCTCATCATCAT 2406188 Query 33121 TTAGT---TTATTCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAA 33177 | ||| || ||||| || | | ||| || || | ||| | ||||| | ||||| | Sbjct 2406189 TGAGTCTGTTGTTCCAGTCGTGAAGATCCTTTGACAAATCGATCTCTTCTGCGGTCCAGA 2406248 Query 33178 ATGATGCCTCTGCCTTTTTATACATATTCCAGAT 33211 | |||||||||||||| || ||||| | |||||| Sbjct 2406249 AAGATGCCTCTGCCTTCTTGTACATCTGCCAGAT 2406282 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633628000198000