Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monilinia_20aucupariae_20[genbank_20GCA_5F002162555.1_202017-05-31] 505 sequences; 54,948,206 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq27 114 1e-20 seq17 102 7e-17 >seq27 Length=788475 Score = 114 bits (126), Expect = 1e-20 Identities = 156/215 (73%), Gaps = 6/215 (3%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| || || ||||| ||||| || || ||||||| | || || ||||| || Sbjct 516001 ATGCAAATCTTCGTTAAGACCTTGACTGGAAAGACCATCACTTTGGAGGTTGAGTCATCG 516060 Query 25059 GACACTATCGAGTCACTG---AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGAC 25115 || || ||||| || || || | || | ||| || || || || ||||||||||| Sbjct 516061 GATACGATCGA--CAATGTCAAATCTAAGATTCAA-GATAAGGAGGGTATTCCACCTGAT 516117 Query 25116 CAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTAC 25175 |||||||| |||| ||||| || || || | ||||||| ||||| || || ||| Sbjct 516118 CAACAGCGTCTTATCTTTGCTGGTAAGCAGCTTGAAGATGGCCGCACGTTGTCAGACTAC 516177 Query 25176 AATATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 || || ||||| ||||| || ||||||| || || Sbjct 516178 AACATCCAAAAGGAATCTACCTTACATTTGGTCCT 516212 Score = 107 bits (118), Expect = 2e-18 Identities = 153/213 (72%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| ||||| ||||| ||||| ||||| | || || | ||||| || ||||| Sbjct 516229 ATGCAAATCTTTGTCAAGACCTTGACTGGTAAGACAATTACGTTAGAAGTAGAATCGTCA 516288 Query 25059 GACACTATCGAGTCAC-TGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 || ||||| || | || | ||| || ||| ||||| || || |||||||||||||| Sbjct 516289 GATACTATTGA-TAACGTCAAGTCGAAGATCCAGGACAAGGAGGGTATTCCACCTGACCA 516347 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177 ||| || | || ||||| || || || || || || | | || | ||||||||| Sbjct 516348 ACAACGATTGATCTTTGCAGGAAAGCAGTTGGAGGACGGCAGAACCCTTTCCGATTACAA 516407 Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 |||||||| || ||| || || || ||||| Sbjct 516408 CATTCAAAAGGAGAGCACCCTGCACTTGGTGCT 516440 Score = 102 bits (112), Expect = 7e-17 Identities = 149/211 (71%), Gaps = 0/211 (0%) Strand=Plus/Plus Query 25006 TATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCTGACACTA 25065 || |||| ||||| | ||||| || ||||||| | ||||| || || |||||||| | Sbjct 515780 TAGTTGTCAAGACCCTCACCGGAAAGACCATCACCCTTGAAGTCGAATCTTCTGACACCA 515839 Query 25066 TCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAACAGCGGA 25125 |||| | ||| ||| ||| || || || || || ||||| || |||||||| Sbjct 515840 TCGATAATGTCAAGTCAAAGATCCAAGATAAGGAGGGTATCCCACCCGATCAACAGCGTT 515899 Query 25126 TTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAATATTCAAA 25185 | ||||| ||||| || ||| | || |||| ||| || | ||| ||||||||||| | Sbjct 515900 TGATTTTCGCCGGAAAGCAACTTGAGGATGGTCGTACCCTCTCCGACTACAATATTCAGA 515959 Query 25186 AAGAATCCACGCTACATTTAGTGCTAAGGCT 25216 | || || || || || || || || || || Sbjct 515960 AGGAGTCGACCCTTCACTTGGTCCTGAGACT 515990 Score = 89.7 bits (98), Expect = 4e-13 Identities = 90/116 (78%), Gaps = 1/116 (1%) Strand=Plus/Plus Query 25096 AAGAAGGGA-TTCCACCTGACCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGAT 25154 ||| ||||| |||| || ||||||||||| | ||||| ||||| || ||| | || ||| Sbjct 515586 AAGGAGGGAATTCCCCCCGACCAACAGCGTTTGATTTTCGCCGGAAAGCAACTTGAGGAT 515645 Query 25155 GATCGCACTGTGGGCGATTACAATATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 | |||||| || | || ||||| |||||||| || || ||||| ||| | ||||| Sbjct 515646 GGTCGCACCTTGAGTGACTACAACATTCAAAAGGAGTCTACGCTCCATCTTGTGCT 515701 >seq17 Length=1064257 Score = 102 bits (112), Expect = 7e-17 Identities = 151/212 (71%), Gaps = 4/212 (2%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || ||||| | || || ||| ||||||| |||| || ||||| || Sbjct 789551 ATGCAGATCTTCGTCAAGACCCTTACGGGCAAAACCATCACCCTCGAGGTTGAGTCTTCG 789610 Query 25059 GACACTATCGAGTCACTG--AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116 ||||| ||||| || || ||| || ||| ||||| || || || ||||| |||| Sbjct 789611 GACACCATCGA--CAATGTCAAGTCCAAGATCCAGGACAAGGAGGGAATCCCACCCGACC 789668 Query 25117 AACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACA 25176 ||||||| | || || || || || ||| | || |||| || ||| | ||| |||| Sbjct 789669 AACAGCGATTGATCTTCGCTGGAAAGCAACTTGAGGATGGCCGTACTCTTTCCGACTACA 789728 Query 25177 ATATTCAAAAAGAATCCACGCTACATTTAGTG 25208 | || ||||| || ||||| || || || ||| Sbjct 789729 ACATCCAAAAGGAGTCCACCCTTCACTTGGTG 789760 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433325333001575