Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Monilinia_20aucupariae_20[genbank_20GCA_5F002162555.1_202017-05-31]
505 sequences; 54,948,206 total letters
Query= NC_008293.1
Length=135454
Score E
Sequences producing significant alignments: (Bits) Value
seq27 114 1e-20
seq17 102 7e-17
>seq27
Length=788475
Score = 114 bits (126), Expect = 1e-20
Identities = 156/215 (73%), Gaps = 6/215 (3%)
Strand=Plus/Plus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
|||||||| || || ||||| ||||| || || ||||||| | || || ||||| ||
Sbjct 516001 ATGCAAATCTTCGTTAAGACCTTGACTGGAAAGACCATCACTTTGGAGGTTGAGTCATCG 516060
Query 25059 GACACTATCGAGTCACTG---AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGAC 25115
|| || ||||| || || || | || | ||| || || || || |||||||||||
Sbjct 516061 GATACGATCGA--CAATGTCAAATCTAAGATTCAA-GATAAGGAGGGTATTCCACCTGAT 516117
Query 25116 CAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTAC 25175
|||||||| |||| ||||| || || || | ||||||| ||||| || || |||
Sbjct 516118 CAACAGCGTCTTATCTTTGCTGGTAAGCAGCTTGAAGATGGCCGCACGTTGTCAGACTAC 516177
Query 25176 AATATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210
|| || ||||| ||||| || ||||||| || ||
Sbjct 516178 AACATCCAAAAGGAATCTACCTTACATTTGGTCCT 516212
Score = 107 bits (118), Expect = 2e-18
Identities = 153/213 (72%), Gaps = 2/213 (1%)
Strand=Plus/Plus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
|||||||| ||||| ||||| ||||| ||||| | || || | ||||| || |||||
Sbjct 516229 ATGCAAATCTTTGTCAAGACCTTGACTGGTAAGACAATTACGTTAGAAGTAGAATCGTCA 516288
Query 25059 GACACTATCGAGTCAC-TGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117
|| ||||| || | || | ||| || ||| ||||| || || ||||||||||||||
Sbjct 516289 GATACTATTGA-TAACGTCAAGTCGAAGATCCAGGACAAGGAGGGTATTCCACCTGACCA 516347
Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177
||| || | || ||||| || || || || || || | | || | |||||||||
Sbjct 516348 ACAACGATTGATCTTTGCAGGAAAGCAGTTGGAGGACGGCAGAACCCTTTCCGATTACAA 516407
Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210
|||||||| || ||| || || || |||||
Sbjct 516408 CATTCAAAAGGAGAGCACCCTGCACTTGGTGCT 516440
Score = 102 bits (112), Expect = 7e-17
Identities = 149/211 (71%), Gaps = 0/211 (0%)
Strand=Plus/Plus
Query 25006 TATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCTGACACTA 25065
|| |||| ||||| | ||||| || ||||||| | ||||| || || |||||||| |
Sbjct 515780 TAGTTGTCAAGACCCTCACCGGAAAGACCATCACCCTTGAAGTCGAATCTTCTGACACCA 515839
Query 25066 TCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAACAGCGGA 25125
|||| | ||| ||| ||| || || || || || ||||| || ||||||||
Sbjct 515840 TCGATAATGTCAAGTCAAAGATCCAAGATAAGGAGGGTATCCCACCCGATCAACAGCGTT 515899
Query 25126 TTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAATATTCAAA 25185
| ||||| ||||| || ||| | || |||| ||| || | ||| ||||||||||| |
Sbjct 515900 TGATTTTCGCCGGAAAGCAACTTGAGGATGGTCGTACCCTCTCCGACTACAATATTCAGA 515959
Query 25186 AAGAATCCACGCTACATTTAGTGCTAAGGCT 25216
| || || || || || || || || || ||
Sbjct 515960 AGGAGTCGACCCTTCACTTGGTCCTGAGACT 515990
Score = 89.7 bits (98), Expect = 4e-13
Identities = 90/116 (78%), Gaps = 1/116 (1%)
Strand=Plus/Plus
Query 25096 AAGAAGGGA-TTCCACCTGACCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGAT 25154
||| ||||| |||| || ||||||||||| | ||||| ||||| || ||| | || |||
Sbjct 515586 AAGGAGGGAATTCCCCCCGACCAACAGCGTTTGATTTTCGCCGGAAAGCAACTTGAGGAT 515645
Query 25155 GATCGCACTGTGGGCGATTACAATATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210
| |||||| || | || ||||| |||||||| || || ||||| ||| | |||||
Sbjct 515646 GGTCGCACCTTGAGTGACTACAACATTCAAAAGGAGTCTACGCTCCATCTTGTGCT 515701
>seq17
Length=1064257
Score = 102 bits (112), Expect = 7e-17
Identities = 151/212 (71%), Gaps = 4/212 (2%)
Strand=Plus/Plus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
||||| || || || ||||| | || || ||| ||||||| |||| || ||||| ||
Sbjct 789551 ATGCAGATCTTCGTCAAGACCCTTACGGGCAAAACCATCACCCTCGAGGTTGAGTCTTCG 789610
Query 25059 GACACTATCGAGTCACTG--AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116
||||| ||||| || || ||| || ||| ||||| || || || ||||| ||||
Sbjct 789611 GACACCATCGA--CAATGTCAAGTCCAAGATCCAGGACAAGGAGGGAATCCCACCCGACC 789668
Query 25117 AACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACA 25176
||||||| | || || || || || ||| | || |||| || ||| | ||| ||||
Sbjct 789669 AACAGCGATTGATCTTCGCTGGAAAGCAACTTGAGGATGGCCGTACTCTTTCCGACTACA 789728
Query 25177 ATATTCAAAAAGAATCCACGCTACATTTAGTG 25208
| || ||||| || ||||| || || || |||
Sbjct 789729 ACATCCAAAAGGAGTCCACCCTTCACTTGGTG 789760
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 433325333001575
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |