Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monilinia_20aucupariae_20[genbank_20GCA_5F002162555.1_202017-05-31] 505 sequences; 54,948,206 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq3 104 3e-17 >seq3 Length=2715537 Score = 104 bits (114), Expect = 3e-17 Identities = 263/391 (67%), Gaps = 8/391 (2%) Strand=Plus/Plus Query 92926 ATCAGCTACAAATTCTATGTACTGAGACATCAAATCACAATTCATTCCTAGAAGACGTAC 92985 |||||| || || || ||||| || ||| | || ||||| |||| ||| | || Sbjct 2405501 ATCAGCAACGAACTCGATGTATTGCTTCATGAGATTCGCGTTCATGCCTAAGAGA-GCAC 2405559 Query 92986 A-GGTAGAGCGTCGGTCAAGAAATCTTTCTCGATTACAACGGCTTCTTTCAAGATTTCTA 93044 | || ||||| ||||||||||| |||| ||||||| | |||||||| | | || ||| Sbjct 2405560 ATGGAAGAGCCTCGGTCAAGAATTCTTGCTCGATTTCGACGGCTTCAGTGATGACATCTT 2405619 Query 93045 TTACT-CTACTATTTGG-TGGTTTTTGTACGACATAATTGTACATTAAGCACGCAAAGTC 93102 || || | |||| ||| || || || | | | ||| || ||||| Sbjct 2405620 GAACGGCT--TGCTTGGATGGGCGGTGCTTGAGATGGGAAAAGAGGAGGCATGCGAAGTC 2405677 Query 93103 GGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTGAATGTTAAACCTGGTAACAG 93162 ||| || | ||||||||| || || || | || ||| ||| || | || | | || Sbjct 2405678 GGTGTGGAGACCTTCGTCACGGGAGATGAGTTCGTTGGAGAAAGTAAGTCCGGCCATGAG 2405737 Query 93163 TCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAGaaaaaaaTATACCTTCCAC 93222 || || ||||||||||| || || || || || || || || || |||||||| || Sbjct 2405738 ACCACGCTTCTTGAGCCAGAAGATAGATGCGAAGGATCCGGAGAAGAAAATACCTTCAAC 2405797 Query 93223 GGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGAATTACTGCTG-ATCCATTTTA 93281 ||| || ||||| || | ||||| ||||| | | | || | || ||||| || | Sbjct 2405798 GGCAGCGAATGCGACGAGACGTTGAGCAAAGGTAGAGTTCTT-GTCTTGAATCCACTTGA 2405856 Query 93282 AAGCCCAATCGGCTTTTTTCTTAATACAAGG 93312 |||||| ||||| || || ||||| ||||| Sbjct 2405857 CAGCCCAGTCGGCCTTCTTTTTAATGCAAGG 2405887 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556857284816200