Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monilinia_20aucupariae_20[genbank_20GCA_5F002162555.1_202017-05-31] 505 sequences; 54,948,206 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq27 152 4e-32 seq17 105 6e-18 seq1 93.3 4e-14 >seq27 Length=788475 Score = 152 bits (168), Expect = 4e-32 Identities = 159/209 (76%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||| || ||||| || || || || || || ||||| | || || || | | Sbjct 516001 ATGCAAATCTTCGTTAAGACCTTGACTGGAAAGACCATCACTTTGGAGGTTGAGTCATCG 516060 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 ||||| | ||| || ||||| || |||||||| ||||||||||||||||| |||||| Sbjct 516061 GATACGATCGACAATGTCAAATCTAAGATTCAAGATAAGGAGGGTATTCCACCTGATCAA 516120 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || |||||||| ||||| || || ||| | || ||| |||||| | || || |||||| Sbjct 516121 CAGCGTCTTATCTTTGCTGGTAAGCAGCTTGAAGATGGCCGCACGTTGTCAGACTACAAC 516180 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGT 22427 || ||||| ||||| ||| ||||||| || Sbjct 516181 ATCCAAAAGGAATCTACCTTACATTTGGT 516209 Score = 123 bits (136), Expect = 2e-23 Identities = 158/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 22229 TTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTGG 22288 |||| || || | ||||| || || |||| |||||||| ||| | | || ||| | | Sbjct 515783 TTGTCAAGACCCTCACCGGAAAGACCATCACCCTTGAAGTCGAATCTTCTGACACCATCG 515842 Query 22289 ACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTA 22348 | || |||| ||| || ||||| ||||||||||| |||||||||||||| ||| | | Sbjct 515843 ATAATGTCAAGTCAAAGATCCAAGATAAGGAGGGTATCCCACCCGATCAACAGCGTTTGA 515902 Query 22349 TATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAG 22408 | || ||||| || || | |||||| || ||| ||||||| ||||| ||||| || | Sbjct 515903 TTTTCGCCGGAAAGCAACTTGAGGATGGTCGTACCCTCTCCGACTACAATATTCAGAAGG 515962 Query 22409 AATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 | || ||| | || || || || || | || || ||| Sbjct 515963 AGTCGACCCTTCACTTGGTCCTGAGACTTCGTGGTGGT 516000 Score = 120 bits (132), Expect = 3e-22 Identities = 152/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||| ||||| || || || || ||||| || | || | ||||| ||| | | Sbjct 516229 ATGCAAATCTTTGTCAAGACCTTGACTGGTAAGACAATTACGTTAGAAGTAGAATCGTCA 516288 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 ||||| | || | |||| || || || |||||||||||||||||||| || ||| Sbjct 516289 GATACTATTGATAACGTCAAGTCGAAGATCCAGGACAAGGAGGGTATTCCACCTGACCAA 516348 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 ||||| | || ||||| || || ||||| ||||| | | ||| | |||||||||||| Sbjct 516349 CAACGATTGATCTTTGCAGGAAAGCAGTTGGAGGACGGCAGAACCCTTTCCGATTACAAC 516408 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGT 22427 |||||||| || |||| | || || || Sbjct 516409 ATTCAAAAGGAGAGCACCCTGCACTTGGT 516437 Score = 105 bits (116), Expect = 6e-18 Identities = 127/173 (73%), Gaps = 0/173 (0%) Strand=Plus/Plus Query 22243 ACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTGGACGATATCAAACAA 22302 || || || || |||| ||||| || ||| ||| ||||||| | ||| | |||| | Sbjct 515514 ACTGGCAAGACTATCACCCTTGAGGTCGAATCCAGCGATACCATTGACAACGTCAAGTCA 515573 Query 22303 AAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAA 22362 || || ||||| |||||||| ||||| ||||| ||||| ||| | || || ||||| || Sbjct 515574 AAGATCCAAGATAAGGAGGGAATTCCCCCCGACCAACAGCGTTTGATTTTCGCCGGAAAG 515633 Query 22363 CAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCAC 22415 || | |||||| |||||| | || |||||||||||||| || || || Sbjct 515634 CAACTTGAGGATGGTCGCACCTTGAGTGACTACAACATTCAAAAGGAGTCTAC 515686 >seq17 Length=1064257 Score = 105 bits (116), Expect = 6e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || || || | || || ||||| |||| || || || || | | Sbjct 789551 ATGCAGATCTTCGTCAAGACCCTTACGGGCAAAACCATCACCCTCGAGGTTGAGTCTTCG 789610 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | ||| || |||| || || || ||||||||||| || |||||||| ||| Sbjct 789611 GACACCATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGAATCCCACCCGACCAA 789670 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || || | || || || || || || | |||||| ||| || | ||||| |||||| Sbjct 789671 CAGCGATTGATCTTCGCTGGAAAGCAACTTGAGGATGGCCGTACTCTTTCCGACTACAAC 789730 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 || ||||| || |||||| | || || || ||||| | || || ||| Sbjct 789731 ATCCAAAAGGAGTCCACCCTTCACTTGGTGTTGCGTCTCCGTGGTGGT 789778 >seq1 Length=6243313 Score = 93.3 bits (102), Expect = 4e-14 Identities = 119/164 (73%), Gaps = 0/164 (0%) Strand=Plus/Plus Query 22243 ACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTGGACGATATCAAACAA 22302 || || || || |||| ||||| || || || | || ||| | ||| || |||| Sbjct 2454611 ACGGGCAAGACCATCACCCTTGAGGTCGAGTCCTCTGACACCATTGACAATGTCAAGTCC 2454670 Query 22303 AAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAA 22362 || || || ||||||||||| ||||| ||||||||||||||| | || || || || || Sbjct 2454671 AAGATCCAGGACAAGGAGGGAATTCCTCCCGATCAACAACGTTTGATCTTCGCTGGAAAG 2454730 Query 22363 CAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAA 22406 || | ||||| || || |||| ||||||||||| ||||| Sbjct 2454731 CAACTTGAGGACGGACGTACTCTCTCAGATTACAACATCCAAAA 2454774 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419725416705325