Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Monilinia_20aucupariae_20[genbank_20GCA_5F002162555.1_202017-05-31]
505 sequences; 54,948,206 total letters
Query= NC_008586.1
Length=131204
Score E
Sequences producing significant alignments: (Bits) Value
seq27 152 4e-32
seq17 105 6e-18
seq1 93.3 4e-14
>seq27
Length=788475
Score = 152 bits (168), Expect = 4e-32
Identities = 159/209 (76%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
|||||||| || ||||| || || || || || || ||||| | || || || | |
Sbjct 516001 ATGCAAATCTTCGTTAAGACCTTGACTGGAAAGACCATCACTTTGGAGGTTGAGTCATCG 516060
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
||||| | ||| || ||||| || |||||||| ||||||||||||||||| ||||||
Sbjct 516061 GATACGATCGACAATGTCAAATCTAAGATTCAAGATAAGGAGGGTATTCCACCTGATCAA 516120
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| |||||||| ||||| || || ||| | || ||| |||||| | || || ||||||
Sbjct 516121 CAGCGTCTTATCTTTGCTGGTAAGCAGCTTGAAGATGGCCGCACGTTGTCAGACTACAAC 516180
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGT 22427
|| ||||| ||||| ||| ||||||| ||
Sbjct 516181 ATCCAAAAGGAATCTACCTTACATTTGGT 516209
Score = 123 bits (136), Expect = 2e-23
Identities = 158/218 (72%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 22229 TTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTGG 22288
|||| || || | ||||| || || |||| |||||||| ||| | | || ||| | |
Sbjct 515783 TTGTCAAGACCCTCACCGGAAAGACCATCACCCTTGAAGTCGAATCTTCTGACACCATCG 515842
Query 22289 ACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTA 22348
| || |||| ||| || ||||| ||||||||||| |||||||||||||| ||| | |
Sbjct 515843 ATAATGTCAAGTCAAAGATCCAAGATAAGGAGGGTATCCCACCCGATCAACAGCGTTTGA 515902
Query 22349 TATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAG 22408
| || ||||| || || | |||||| || ||| ||||||| ||||| ||||| || |
Sbjct 515903 TTTTCGCCGGAAAGCAACTTGAGGATGGTCGTACCCTCTCCGACTACAATATTCAGAAGG 515962
Query 22409 AATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446
| || ||| | || || || || || | || || |||
Sbjct 515963 AGTCGACCCTTCACTTGGTCCTGAGACTTCGTGGTGGT 516000
Score = 120 bits (132), Expect = 3e-22
Identities = 152/209 (73%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
|||||||| ||||| || || || || ||||| || | || | ||||| ||| | |
Sbjct 516229 ATGCAAATCTTTGTCAAGACCTTGACTGGTAAGACAATTACGTTAGAAGTAGAATCGTCA 516288
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
||||| | || | |||| || || || |||||||||||||||||||| || |||
Sbjct 516289 GATACTATTGATAACGTCAAGTCGAAGATCCAGGACAAGGAGGGTATTCCACCTGACCAA 516348
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
||||| | || ||||| || || ||||| ||||| | | ||| | ||||||||||||
Sbjct 516349 CAACGATTGATCTTTGCAGGAAAGCAGTTGGAGGACGGCAGAACCCTTTCCGATTACAAC 516408
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGT 22427
|||||||| || |||| | || || ||
Sbjct 516409 ATTCAAAAGGAGAGCACCCTGCACTTGGT 516437
Score = 105 bits (116), Expect = 6e-18
Identities = 127/173 (73%), Gaps = 0/173 (0%)
Strand=Plus/Plus
Query 22243 ACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTGGACGATATCAAACAA 22302
|| || || || |||| ||||| || ||| ||| ||||||| | ||| | |||| |
Sbjct 515514 ACTGGCAAGACTATCACCCTTGAGGTCGAATCCAGCGATACCATTGACAACGTCAAGTCA 515573
Query 22303 AAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAA 22362
|| || ||||| |||||||| ||||| ||||| ||||| ||| | || || ||||| ||
Sbjct 515574 AAGATCCAAGATAAGGAGGGAATTCCCCCCGACCAACAGCGTTTGATTTTCGCCGGAAAG 515633
Query 22363 CAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCAC 22415
|| | |||||| |||||| | || |||||||||||||| || || ||
Sbjct 515634 CAACTTGAGGATGGTCGCACCTTGAGTGACTACAACATTCAAAAGGAGTCTAC 515686
>seq17
Length=1064257
Score = 105 bits (116), Expect = 6e-18
Identities = 160/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||| || || || || || | || || ||||| |||| || || || || | |
Sbjct 789551 ATGCAGATCTTCGTCAAGACCCTTACGGGCAAAACCATCACCCTCGAGGTTGAGTCTTCG 789610
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| ||| | ||| || |||| || || || ||||||||||| || |||||||| |||
Sbjct 789611 GACACCATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGAATCCCACCCGACCAA 789670
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| || | || || || || || || | |||||| ||| || | ||||| ||||||
Sbjct 789671 CAGCGATTGATCTTCGCTGGAAAGCAACTTGAGGATGGCCGTACTCTTTCCGACTACAAC 789730
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446
|| ||||| || |||||| | || || || ||||| | || || |||
Sbjct 789731 ATCCAAAAGGAGTCCACCCTTCACTTGGTGTTGCGTCTCCGTGGTGGT 789778
>seq1
Length=6243313
Score = 93.3 bits (102), Expect = 4e-14
Identities = 119/164 (73%), Gaps = 0/164 (0%)
Strand=Plus/Plus
Query 22243 ACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTGGACGATATCAAACAA 22302
|| || || || |||| ||||| || || || | || ||| | ||| || ||||
Sbjct 2454611 ACGGGCAAGACCATCACCCTTGAGGTCGAGTCCTCTGACACCATTGACAATGTCAAGTCC 2454670
Query 22303 AAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAA 22362
|| || || ||||||||||| ||||| ||||||||||||||| | || || || || ||
Sbjct 2454671 AAGATCCAGGACAAGGAGGGAATTCCTCCCGATCAACAACGTTTGATCTTCGCTGGAAAG 2454730
Query 22363 CAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAA 22406
|| | ||||| || || |||| ||||||||||| |||||
Sbjct 2454731 CAACTTGAGGACGGACGTACTCTCTCAGATTACAACATCCAAAA 2454774
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 419725416705325
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |