Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monilinia_20aucupariae_20[genbank_20GCA_5F002162555.1_202017-05-31] 505 sequences; 54,948,206 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq8 87.8 4e-12 >seq8 Length=1964072 Score = 87.8 bits (96), Expect = 4e-12 Identities = 178/262 (68%), Gaps = 2/262 (1%) Strand=Plus/Minus Query 293122 TGATCGACAAAGGCACCACGATCAGCAGCGAGGTCAATCACTGTCTTCATAGAGATCTCC 293181 ||||||| |||||||||||||| ||||| | | || | ||| | ||| || ||| Sbjct 141923 TGATCGATGAAGGCACCACGATCGGCAGCCATCTGAACGATTGTTCGCTGAGAAATTTCC 141864 Query 293182 CACGATGTCTTGTACACTGCCTTGACATCAGGATGAATGCCAATAACCTTCTGGATAGAC 293241 || |||||||| | ||||||| ||||| | || | || || ||||| || Sbjct 141863 CAAACAGTCTTGTAAAGGGCCTTGATATCAGCTGGGATATTAGGAATGTTTTGGATGGAT 141804 Query 293242 CCTCCGTTGGCAATAATCTGGTTCTTCATTGTCTCGGACC-AAGTCCCACGAGCAATGAG 293300 || || | || || || |||||||||| | || |||| ||| |||| | | | ||| Sbjct 141803 CCGCCATCAGCGATGATACGGTTCTTCATGTTGTCCGACCAAAGACCCA-TATCGACGAG 141745 Query 293301 CTCGCGGACAAGGTAAGAGTTGACAACGGGGAACTCACCAGCGAGAGTGCGACGGCTGTA 293360 || || ||| | | ||||| || |||| || ||||| ||| ||||| ||| Sbjct 141744 GTCCTTGAGAAGCCATGGATTGACGACTTGGAATTCTCCAGCAAGAACACGACGAGAGTA 141685 Query 293361 AATGTTCGAAGTGATGGGTTCG 293382 |||||| |||||| |||||| Sbjct 141684 AATGTTTGAAGTGTAAGGTTCG 141663 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027830149574705