Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monilinia_20aucupariae_20[genbank_20GCA_5F002162555.1_202017-05-31] 505 sequences; 54,948,206 total letters Query= NC_009011.2 Length=131331 Score E Sequences producing significant alignments: (Bits) Value seq27 118 9e-22 seq17 107 2e-18 seq1 89.7 4e-13 >seq27 Length=788475 Score = 118 bits (130), Expect = 9e-22 Identities = 151/208 (73%), Gaps = 0/208 (0%) Strand=Plus/Minus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| ||||| || | | || | ||| | |||||| || |||||||||||||| || Sbjct 515719 ATACCACCACGAAGGCGGAGCACAAGATGGAGCGTAGACTCCTTTTGAATGTTGTAGTCA 515660 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 |||| || ||| ||| |||||||| || || ||| | || | |||||||||||| || Sbjct 515659 CTCAAGGTGCGACCATCCTCAAGTTGCTTTCCGGCGAAAATCAAACGCTGTTGGTCGGGG 515600 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 ||||| || || || || |||||| || | | |||| ||| ||| |||||||| Sbjct 515599 GGAATTCCCTCCTTATCTTGGATCTTTGACTTGACGTTGTCAATGGTATCGCTGGATTCG 515540 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCA 114360 || || | ||| | || ||||| |||| Sbjct 515539 ACCTCAAGGGTGATAGTCTTGCCAGTCA 515512 Score = 100 bits (110), Expect = 2e-16 Identities = 160/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| ||||| || | | || ||||||| |||||||| ||||| |||||||| || Sbjct 516230 ATACCACCACGGAGACGAAGGACCAAATGTAAGGTAGATTCCTTTTGGATGTTGTAGTCT 516171 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 || || || ||||||||| || |||||||| |||| ||||||||||| || || Sbjct 516170 GACAACGTGCGGCCATCTTCAAGCTGCTTACCAGCAAAGATAAGACGCTGTTGATCAGGT 516111 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 ||||| || || || || |||||| ||| | | || | || || | || || Sbjct 516110 GGAATACCCTCCTTATCTTGAATCTTAGATTTGACATTGTCGATCGTATCCGATGACTCA 516051 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || |||| || | || || || |||| || || || || || ||||| Sbjct 516050 ACCTCCAAAGTGATGGTCTTTCCAGTCAAGGTCTTAACGAAGATTTGCAT 516001 >seq17 Length=1064257 Score = 107 bits (118), Expect = 2e-18 Identities = 163/232 (70%), Gaps = 0/232 (0%) Strand=Plus/Minus Query 114155 ACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCT 114214 ||| ||||| || | ||| || || || | || || || ||||| |||||||| ||| Sbjct 789778 ACCACCACGGAGACGCAACACCAAGTGAAGGGTGGACTCCTTTTGGATGTTGTAGTCGGA 789719 Query 114215 CATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGG 114274 | |||||| ||| |||||||| || |||||| |||| | ||||||||||| || || Sbjct 789718 AAGAGTACGGCCATCCTCAAGTTGCTTTCCAGCGAAGATCAATCGCTGTTGGTCGGGTGG 789659 Query 114275 AATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGAC 114334 || || || ||||| ||||| || | | || | |||||| | || || || Sbjct 789658 GATTCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATGGTGTCCGAAGACTCAAC 789599 Query 114335 GTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATGGCT 114386 || | ||| | |||||||| || || || || || || ||||||||| || Sbjct 789598 CTCGAGGGTGATGGTTTTGCCCGTAAGGGTCTTGACGAAGATCTGCATGACT 789547 >seq1 Length=6243313 Score = 89.7 bits (98), Expect = 4e-13 Identities = 127/179 (71%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 114195 TTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATG 114254 ||||| ||||||||||| | |||||| || |||||||| || |||||| |||| Sbjct 2454774 TTTTGGATGTTGTAATCTGAGAGAGTACGTCCGTCCTCAAGTTGCTTTCCAGCGAAGATC 2454715 Query 114255 AGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCA 114314 | ||| ||||| || |||||||| || || ||||| ||||| || | | ||| Sbjct 2454714 AAACGTTGTTGATCGGGAGGAATTCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCA 2454655 Query 114315 ACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAA 114373 | |||||| | ||| ||||| || | ||| | || ||||| || || || || || || Sbjct 2454654 ATGGTGTCAGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTAAGGGTCTTGACGAA 2454596 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 420131814204060