Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monilinia_20aucupariae_20[genbank_20GCA_5F002162555.1_202017-05-31] 505 sequences; 54,948,206 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq3 183 6e-41 seq8 143 5e-29 >seq3 Length=2715537 Score = 183 bits (202), Expect = 6e-41 Identities = 357/516 (69%), Gaps = 11/516 (2%) Strand=Plus/Minus Query 42633 CCCTGCATCAAGAAGAAGGCGGACTGGGCGCTCAACTGGATCGAGAGTCCCGA-CGCAAC 42691 || ||||| || |||||||| |||||||| |||| ||||| | || | || | | || Sbjct 2405887 CCTTGCATTAAAAAGAAGGCCGACTGGGCTGTCAAGTGGATTCA-AGACAAGAACTCTAC 2405829 Query 42692 GTTCGGCGAGAGGCTGGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTT 42751 || | | | || || || || | ||||| || || || |||||||| || |||| Sbjct 2405828 CTTTGCTCAACGTCTCGTCGCATTCGCTGCCGTTGAAGGTATTTTCTTCTCCGGATCCTT 2405769 Query 42752 CGCCTCCATCTTCTGGCTCAAGCAGAA-GGTGTCGATGCCCGGACTCACCTTCTCGAACG 42810 ||| || ||||||||||||||| || ||| || ||| ||||||| || ||||| |||| Sbjct 2405768 CGCATCTATCTTCTGGCTCAAGAAGCGTGGTCTC-ATGGCCGGACTTACTTTCTCCAACG 2405710 Query 42811 AACTCATCAGCAGGGACGAGGGGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCC 42870 |||||||| | | ||||| || || || | ||||| || |||||||| || || || Sbjct 2405709 AACTCATCTCCCGTGACGAAGGTCTCCACACCGACTTCGCATGCCTCCTCTTTTC---CC 2405653 Query 42871 ACCTCAGGCACAAGCCCTCGAAGGAGCGGGTCCGGGCCATCATCACGGAGGCCGTGGAGA 42930 | |||| |||| || || ||| | || | | ||||||| || ||||| || | Sbjct 2405652 ATCTCAAGCACCGCCCATCCAAGCAAGCCGTTCAAGATGTCATCACTGAAGCCGTCGAAA 2405593 Query 42931 TCGAGAAGGAGTTCCTCACGCAGTCGCTGCC-CGTGTCCCTGGTCGGCATGAACCACGAC 42989 ||||| | || ||| | || || | || || ||| | || | ||||||||| | Sbjct 2405592 TCGAGCAAGAATTCTTGACCGAGGCTCTTCCATGTG-CTCTCTTAGGCATGAACGCGAAT 2405534 Query 42990 CTCATG-TGCAAGTACATCCAGTACGTCGCCGACCATCTCCTGTGCCAGATGGGTCTCAG 43048 |||||| |||| |||||| ||| ||| || || | ||| || | |||| | Sbjct 2405533 CTCATGAAGCAA-TACATCGAGTTCGTTGCTGATCGTCTTCTCATCGCTTTGGGCAACGA 2405475 Query 43049 CCGCCTCTACAACACGCCGTGCCCCTTCGACTTTATGGAGAACATCTCGTTGGAGGGCAA 43108 | |||| | | ||| ||||| || |||||||||||||| |||| ||||| Sbjct 2405474 GAAATTTTACAGGTCTGCCAACCCATTCGATTTCATGGAGAACATCTCATTGGCCGGCAA 2405415 Query 43109 GACCAACTTTTTCGAGAAGCGCGTCGCCGACTACCA 43144 |||||||||||||||||| | || | || ||||| Sbjct 2405414 AACCAACTTTTTCGAGAAGAGAGTTGGTGATTACCA 2405379 >seq8 Length=1964072 Score = 143 bits (158), Expect = 5e-29 Identities = 470/723 (65%), Gaps = 12/723 (2%) Strand=Plus/Minus Query 244723 GTACTGGACAATCTCGGTGCAGAGGTTACTGCACTTGATGGTGCCCAGGTGCTGGTGATT 244782 ||||| ||||||||| ||||| | ||| || || || || |||| || || || Sbjct 141114 GTACTCGACAATCTCTGTGCATAAGTTGGAGCTGCGAATAGTACCAAGGTTCTTTTGGTT 141055 Query 244783 GGACTTGGCGTTGCAGGCGTCCTTGTAGAGCATGAAGGGCCCCCCGGTCTCGAGCTGGGC 244842 ||| |||||| || || ||||| |||||||| || || |||||| ||||| Sbjct 141054 ACTCTTCTTGTTGCATGCATCTTTGTAAAGCATGAAAGGATTTCCCGTCTCGGTTTGGGC 140995 Query 244843 GACGAGGACGCTGTTCCAGAGGTCCCTAGCCTTGACCGTCCTGCGAGCCTTGCCCTCTGC 244902 |||| | || ||| || | |||||||| ||| ||||| ||||||| | Sbjct 140994 CTCGAGAATAGAGTACCAAAGCTTTTGAGCCTTGATAGTCTTGCGACCCTTGCCAGCCTT 140935 Query 244903 CTCGTAGCGGGTGTACAGGGCCTCGAACTCGGGGCCCCAGACCTCGTCTAGGCCGGGGCA 244962 |||||| | || || ||||||||||| ||| | || || | | || || || Sbjct 140934 CTCGTAACTCTCATAGAGAGCCTCGAACTCTTCGCCATAAACATCTGCCAAACCCGGACA 140875 Query 244963 --CGACGCCGGGCACATGAGACTCCACTCGCCGCCGTCCTTGACCCTCTGCATGAAGAGG 245020 || | |||||||| ||| ||||||| || | | || | || ||| || || Sbjct 140874 TTCGTTG--GGGCACATAAGAGTCCACTCTCCATTCTTTTCAACACGCTTCATAAATAGA 140817 Query 245021 TCGGGGATCCAGAGGGCCTGGAAGAGGTCCCTGGTCCTCTGCTCGTCCGAGCCAGTGTTC 245080 || || ||||| | ||| | |||||| || | | | || ||| |||| ||| Sbjct 140816 TCAGGAATCCACAAGGCGTAGAAGAGATCACGTGCACGAACTTCTTCCTTGCCATGATTC 140757 Query 245081 TTCCTCAGCTCCAAAAAGTCAAAGACGTCGACGTGCCAGGGCTCCATGTAGACAGCGAGG 245140 || | ||| || | ||| || || ||||| | ||||| || || | ||| | ||||| Sbjct 140756 TTGCGCAGATCAAGAAACTCGAAAACGTCAGCATGCCATGGTTCAAGGTAAATAGCGAAA 140697 Query 245141 GCGCCGGGCCGCTTGTTGCCTCCCTGGTCCACCATCCTCTCGAGCGCGTTGAAGATGCGC 245200 || || || ||||| || || || || || || || || |||||| | || Sbjct 140696 GCACCAGGTCGCTTATTACCACCTTGATCAACATATCTGGCGGTGTTGTTGAAAACTCGG 140637 Query 245201 AGGGTAGGCACTATGCCGTTAGAGTGGCCGTTGGTGCCCTTGATGTAGGCGCCCTTGCCC 245260 || |||| || |||||||| |||| ||||||||||| |||||| || || | | Sbjct 140636 AGCATAGGGACAATGCCGTTGGAGTTTCCGTTGGTGCCGGCGATGTATGCACCAGTAGCA 140577 Query 245261 CTGAGGTTGCTGA---TGGACATGCCTAGTCCGCCGGCGTGCTTGGAGATGAGGGCGCAG 245317 | || || ||| | || | || | || ||||| | ||| || || | ||| || Sbjct 140576 CGGATTCTG-TGAACGTTGAGA--CCAATACCACCGGCATTCTTCGAAATCATGGCACAA 140520 Query 245318 CTCTTGATGGTGTCTGCTATGCCCTCCATGCTGTCCGACTTCATGTTGAGCAGAAAGCAG 245377 |||| | ||||| || || || || |||||| |||||||| || || ||||| Sbjct 140519 ATCTTCAAAGTGTCGTAAATACCATCAATACTGTCCTCCTTCATGTCGATGAGGAAGCAT 140460 Query 245378 GAGGACAGCTGGGGCTTG-GGGCTGCACGAGTTGAACAGAGTGGGGCTGGCGTGGGTAAA 245436 || || || | | ||||| || | | || ||| || || ||| ||| ||||| || Sbjct 140459 GATGAAAG-TTGTGCTTGTGGAGTTCCCGCAGAGAAGAGTGTCGGGGAGGCATGGGTGAA 140401 Query 245437 GTA 245439 ||| Sbjct 140400 GTA 140398 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944333238858800