Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Monilinia_20aucupariae_20[genbank_20GCA_5F002162555.1_202017-05-31]
505 sequences; 54,948,206 total letters
Query= NC_009127.1
Length=295146
Score E
Sequences producing significant alignments: (Bits) Value
seq3 183 6e-41
seq8 143 5e-29
>seq3
Length=2715537
Score = 183 bits (202), Expect = 6e-41
Identities = 357/516 (69%), Gaps = 11/516 (2%)
Strand=Plus/Minus
Query 42633 CCCTGCATCAAGAAGAAGGCGGACTGGGCGCTCAACTGGATCGAGAGTCCCGA-CGCAAC 42691
|| ||||| || |||||||| |||||||| |||| ||||| | || | || | | ||
Sbjct 2405887 CCTTGCATTAAAAAGAAGGCCGACTGGGCTGTCAAGTGGATTCA-AGACAAGAACTCTAC 2405829
Query 42692 GTTCGGCGAGAGGCTGGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTT 42751
|| | | | || || || || | ||||| || || || |||||||| || ||||
Sbjct 2405828 CTTTGCTCAACGTCTCGTCGCATTCGCTGCCGTTGAAGGTATTTTCTTCTCCGGATCCTT 2405769
Query 42752 CGCCTCCATCTTCTGGCTCAAGCAGAA-GGTGTCGATGCCCGGACTCACCTTCTCGAACG 42810
||| || ||||||||||||||| || ||| || ||| ||||||| || ||||| ||||
Sbjct 2405768 CGCATCTATCTTCTGGCTCAAGAAGCGTGGTCTC-ATGGCCGGACTTACTTTCTCCAACG 2405710
Query 42811 AACTCATCAGCAGGGACGAGGGGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCC 42870
|||||||| | | ||||| || || || | ||||| || |||||||| || || ||
Sbjct 2405709 AACTCATCTCCCGTGACGAAGGTCTCCACACCGACTTCGCATGCCTCCTCTTTTC---CC 2405653
Query 42871 ACCTCAGGCACAAGCCCTCGAAGGAGCGGGTCCGGGCCATCATCACGGAGGCCGTGGAGA 42930
| |||| |||| || || ||| | || | | ||||||| || ||||| || |
Sbjct 2405652 ATCTCAAGCACCGCCCATCCAAGCAAGCCGTTCAAGATGTCATCACTGAAGCCGTCGAAA 2405593
Query 42931 TCGAGAAGGAGTTCCTCACGCAGTCGCTGCC-CGTGTCCCTGGTCGGCATGAACCACGAC 42989
||||| | || ||| | || || | || || ||| | || | ||||||||| |
Sbjct 2405592 TCGAGCAAGAATTCTTGACCGAGGCTCTTCCATGTG-CTCTCTTAGGCATGAACGCGAAT 2405534
Query 42990 CTCATG-TGCAAGTACATCCAGTACGTCGCCGACCATCTCCTGTGCCAGATGGGTCTCAG 43048
|||||| |||| |||||| ||| ||| || || | ||| || | |||| |
Sbjct 2405533 CTCATGAAGCAA-TACATCGAGTTCGTTGCTGATCGTCTTCTCATCGCTTTGGGCAACGA 2405475
Query 43049 CCGCCTCTACAACACGCCGTGCCCCTTCGACTTTATGGAGAACATCTCGTTGGAGGGCAA 43108
| |||| | | ||| ||||| || |||||||||||||| |||| |||||
Sbjct 2405474 GAAATTTTACAGGTCTGCCAACCCATTCGATTTCATGGAGAACATCTCATTGGCCGGCAA 2405415
Query 43109 GACCAACTTTTTCGAGAAGCGCGTCGCCGACTACCA 43144
|||||||||||||||||| | || | || |||||
Sbjct 2405414 AACCAACTTTTTCGAGAAGAGAGTTGGTGATTACCA 2405379
>seq8
Length=1964072
Score = 143 bits (158), Expect = 5e-29
Identities = 470/723 (65%), Gaps = 12/723 (2%)
Strand=Plus/Minus
Query 244723 GTACTGGACAATCTCGGTGCAGAGGTTACTGCACTTGATGGTGCCCAGGTGCTGGTGATT 244782
||||| ||||||||| ||||| | ||| || || || || |||| || || ||
Sbjct 141114 GTACTCGACAATCTCTGTGCATAAGTTGGAGCTGCGAATAGTACCAAGGTTCTTTTGGTT 141055
Query 244783 GGACTTGGCGTTGCAGGCGTCCTTGTAGAGCATGAAGGGCCCCCCGGTCTCGAGCTGGGC 244842
||| |||||| || || ||||| |||||||| || || |||||| |||||
Sbjct 141054 ACTCTTCTTGTTGCATGCATCTTTGTAAAGCATGAAAGGATTTCCCGTCTCGGTTTGGGC 140995
Query 244843 GACGAGGACGCTGTTCCAGAGGTCCCTAGCCTTGACCGTCCTGCGAGCCTTGCCCTCTGC 244902
|||| | || ||| || | |||||||| ||| ||||| ||||||| |
Sbjct 140994 CTCGAGAATAGAGTACCAAAGCTTTTGAGCCTTGATAGTCTTGCGACCCTTGCCAGCCTT 140935
Query 244903 CTCGTAGCGGGTGTACAGGGCCTCGAACTCGGGGCCCCAGACCTCGTCTAGGCCGGGGCA 244962
|||||| | || || ||||||||||| ||| | || || | | || || ||
Sbjct 140934 CTCGTAACTCTCATAGAGAGCCTCGAACTCTTCGCCATAAACATCTGCCAAACCCGGACA 140875
Query 244963 --CGACGCCGGGCACATGAGACTCCACTCGCCGCCGTCCTTGACCCTCTGCATGAAGAGG 245020
|| | |||||||| ||| ||||||| || | | || | || ||| || ||
Sbjct 140874 TTCGTTG--GGGCACATAAGAGTCCACTCTCCATTCTTTTCAACACGCTTCATAAATAGA 140817
Query 245021 TCGGGGATCCAGAGGGCCTGGAAGAGGTCCCTGGTCCTCTGCTCGTCCGAGCCAGTGTTC 245080
|| || ||||| | ||| | |||||| || | | | || ||| |||| |||
Sbjct 140816 TCAGGAATCCACAAGGCGTAGAAGAGATCACGTGCACGAACTTCTTCCTTGCCATGATTC 140757
Query 245081 TTCCTCAGCTCCAAAAAGTCAAAGACGTCGACGTGCCAGGGCTCCATGTAGACAGCGAGG 245140
|| | ||| || | ||| || || ||||| | ||||| || || | ||| | |||||
Sbjct 140756 TTGCGCAGATCAAGAAACTCGAAAACGTCAGCATGCCATGGTTCAAGGTAAATAGCGAAA 140697
Query 245141 GCGCCGGGCCGCTTGTTGCCTCCCTGGTCCACCATCCTCTCGAGCGCGTTGAAGATGCGC 245200
|| || || ||||| || || || || || || || || |||||| | ||
Sbjct 140696 GCACCAGGTCGCTTATTACCACCTTGATCAACATATCTGGCGGTGTTGTTGAAAACTCGG 140637
Query 245201 AGGGTAGGCACTATGCCGTTAGAGTGGCCGTTGGTGCCCTTGATGTAGGCGCCCTTGCCC 245260
|| |||| || |||||||| |||| ||||||||||| |||||| || || | |
Sbjct 140636 AGCATAGGGACAATGCCGTTGGAGTTTCCGTTGGTGCCGGCGATGTATGCACCAGTAGCA 140577
Query 245261 CTGAGGTTGCTGA---TGGACATGCCTAGTCCGCCGGCGTGCTTGGAGATGAGGGCGCAG 245317
| || || ||| | || | || | || ||||| | ||| || || | ||| ||
Sbjct 140576 CGGATTCTG-TGAACGTTGAGA--CCAATACCACCGGCATTCTTCGAAATCATGGCACAA 140520
Query 245318 CTCTTGATGGTGTCTGCTATGCCCTCCATGCTGTCCGACTTCATGTTGAGCAGAAAGCAG 245377
|||| | ||||| || || || || |||||| |||||||| || || |||||
Sbjct 140519 ATCTTCAAAGTGTCGTAAATACCATCAATACTGTCCTCCTTCATGTCGATGAGGAAGCAT 140460
Query 245378 GAGGACAGCTGGGGCTTG-GGGCTGCACGAGTTGAACAGAGTGGGGCTGGCGTGGGTAAA 245436
|| || || | | ||||| || | | || ||| || || ||| ||| ||||| ||
Sbjct 140459 GATGAAAG-TTGTGCTTGTGGAGTTCCCGCAGAGAAGAGTGTCGGGGAGGCATGGGTGAA 140401
Query 245437 GTA 245439
|||
Sbjct 140400 GTA 140398
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 944333238858800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |