Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Monilinia_20aucupariae_20[genbank_20GCA_5F002162555.1_202017-05-31]
505 sequences; 54,948,206 total letters
Query= NC_010240.1
Length=169794
Score E
Sequences producing significant alignments: (Bits) Value
seq17 129 6e-25
seq27 109 6e-19
>seq17
Length=1064257
Score = 129 bits (142), Expect = 6e-25
Identities = 158/216 (73%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 41993 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 42052
|||||||||||| || | ||| ||||||||| || ||||| || | ||||| || |
Sbjct 789766 ACGCAACACCAAGTGAAGGGTGGACTCCTTTTGGATGTTGTAGTCGGAAAGAGTACGGCC 789707
Query 42053 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTT 42112
|| || || ||||| |||||||| || | |||||| ||||||| ||| | | ||||||
Sbjct 789706 ATCCTCAAGTTGCTTTCCAGCGAAGATCAATCGCTGTTGGTCGGGTGGGATTCCCTCCTT 789647
Query 42113 GTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGAT 42172
|||| ||| || |||| | | | ||||| || || || |||| |||||
Sbjct 789646 GTCCTGGATCTTGGACTTGACATTGTCGATGGTGTCCGAAGACTCAACCTCGAGGGTGAT 789587
Query 42173 GGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208
|||||||||||| || ||||| || ||||| |||||
Sbjct 789586 GGTTTTGCCCGTAAGGGTCTTGACGAAGATCTGCAT 789551
>seq27
Length=788475
Score = 109 bits (120), Expect = 6e-19
Identities = 164/233 (70%), Gaps = 0/233 (0%)
Strand=Plus/Minus
Query 41976 TATCGACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAA 42035
||| |||| || | | ||| | |||||| |||| ||||||||||||||||| ||||||
Sbjct 516461 TATTGACCACCACGAAGACGGAGCACCAAGTGCAGGGTGCTCTCCTTTTGAATGTTGTAA 516402
Query 42036 TCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCG 42095
|| | || || | |||| || | |||||| || || || || | ||| || |||||
Sbjct 516401 TCGGAAAGGGTTCTGCCGTCCTCCAACTGCTTTCCTGCAAAGATCAATCGTTGTTGGTCA 516342
Query 42096 GCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGAT 42155
| ||| | | |||||||||| ||| || |||| | | | || || ||||
Sbjct 516341 GGTGGAATACCCTCCTTGTCCTGGATCTTCGACTTGACGTTATCAATAGTATCTGACGAT 516282
Query 42156 TCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208
|| || || | ||| || || || || || | ||||| ||||||||||||||
Sbjct 516281 TCTACTTCTAACGTAATTGTCTTACCAGTCAAGGTCTTGACAAAGATTTGCAT 516229
Score = 84.2 bits (92), Expect = 2e-11
Identities = 146/210 (70%), Gaps = 2/210 (1%)
Strand=Plus/Minus
Query 42000 ACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCT 42059
|||||||| || || |||||||| || ||||| || | || || || | || ||
Sbjct 516209 ACCAAATGTAAGGTAGATTCCTTTTGGATGTTGTAGTCTGACAACGTGCGGCCATCTTCA 516150
Query 42060 AGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATG 42119
|||||||||||||| || || || ||||| || || | ||| | | |||||| | | ||
Sbjct 516149 AGCTGCTTACCAGCAAAGATAAGACGCTGTTGATCAGGTGGAATACCCTCCTTAT-CTTG 516091
Query 42120 ATTTTTTG-TTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTT 42178
| | || | ||||| | | | ||| || || || || || | |||||||| ||
Sbjct 516090 AATCTTAGATTTGACATTGTCGATCGTATCCGATGACTCAACCTCCAAAGTGATGGTCTT 516031
Query 42179 GCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208
|| || | ||||| || |||||||||||
Sbjct 516030 TCCAGTCAAGGTCTTAACGAAGATTTGCAT 516001
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 543209370969200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |