Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monilinia_20aucupariae_20[genbank_20GCA_5F002162555.1_202017-05-31] 505 sequences; 54,948,206 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq27 105 7e-18 >seq27 Length=788475 Score = 105 bits (116), Expect = 7e-18 Identities = 151/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 64231 AAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTC 64290 ||| || | ||| | || ||||| ||||| |||||||| |||| | ||||| | || Sbjct 516213 AAGGACCAAATGTAAGGTAGATTCCTTTTGGATGTTGTAGTCTGACAACGTGCGGCCATC 516154 Query 64291 TTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTC 64350 |||||||||||| || ||| | || || ||||| || || || ||||| || || || || Sbjct 516153 TTCAAGCTGCTTACCAGCAAAGATAAGACGCTGTTGATCAGGTGGAATACCCTCCTTATC 516094 Query 64351 TTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGT 64410 ||| || || || ||| || | ||||| | || || || | ||| | ||| Sbjct 516093 TTGAATCTTAGATTTGACATTGTCGATCGTATCCGATGACTCAACCTCCAAAGTGATGGT 516034 Query 64411 CTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 ||| || ||||| || || ||||| |||||||| Sbjct 516033 CTTTCCAGTCAAGGTCTTAACGAAGATTTGCAT 516001 Score = 104 bits (114), Expect = 2e-17 Identities = 137/190 (72%), Gaps = 0/190 (0%) Strand=Plus/Minus Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291 ||||| ||||| | ||| || || |||||||||||||| || | |||||| | || Sbjct 515701 AGCACAAGATGGAGCGTAGACTCCTTTTGAATGTTGTAGTCACTCAAGGTGCGACCATCC 515642 Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351 ||||| ||||| ||||| |||| | ||||| |||||||| |||||||| || || ||| Sbjct 515641 TCAAGTTGCTTTCCGGCGAAAATCAAACGCTGTTGGTCGGGGGGAATTCCCTCCTTATCT 515582 Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411 || || ||| ||| || || | ||||| | || || || || | || | ||| Sbjct 515581 TGGATCTTTGACTTGACGTTGTCAATGGTATCGCTGGATTCGACCTCAAGGGTGATAGTC 515522 Query 64412 TTGCCGGTCA 64421 ||||| |||| Sbjct 515521 TTGCCAGTCA 515512 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499641645992200