Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monilinia_20aucupariae_20[genbank_20GCA_5F002162555.1_202017-05-31] 505 sequences; 54,948,206 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq8 154 1e-32 >seq8 Length=1964072 Score = 154 bits (170), Expect = 1e-32 Identities = 594/927 (64%), Gaps = 6/927 (1%) Strand=Plus/Plus Query 93715 AATTACGATTACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGC 93774 || ||| | ||||| | ||||| ||||| |||| || ||||| || | |||||| Sbjct 140233 AACTACCAATACTTCGGGTTCAAGACTCTCGAGAGATCATACCTTCTACGCCTCGATGGC 140292 Query 93775 AGGGTTTCCGAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCAC 93834 | ||| | || || || || || || | ||||| || ||| | || ||||| || | Sbjct 140293 AAAGTTGCAGAACGTCCACAACAAATGATCATGCGTGTTGCCGTTGGTATTCATGGTGAT 140352 Query 93835 GACATGCCGAATGTTTTGCGGGCTTTCAGAGACATGCGGGACAAGAGGTATACCATGGCC 93894 || || || || | | | | | || ||| ||||| | ||| ||| Sbjct 140353 GATATTGAGAGTGCTATCGAGACATACAACTTGATGTCAAACAAGTACTTCACCCATGCC 140412 Query 93895 ACCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGAT- 93953 ||||||| || ||| ||||| || || |||| | || || || ||||| || Sbjct 140413 TCCCCGACACTCTTCTCTGCGGGAACTCCACAAGCACAACTTTCATCATGCTTCCTCATC 140472 Query 93954 GACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCAT 94013 ||| | |||| ||| || || |||| ||||| | ||| ||||| | || Sbjct 140473 GAC-ATGAAGGAGGACAGTATTGATGGTATTTACGACACTTTGAAGATTTGTGCCATGAT 140531 Query 94014 CTCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCTA 94073 || || | || || || || || ||| || ||| | ||||| | ||| | || Sbjct 140532 TTCGAAGAATGCCGGTGGTATTGGTCTCAACGTTCACAGAATCCGTGCTACTGGTGCATA 140591 Query 94074 CATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAA 94133 |||| ||| ||||| || | |||||||||| | |||||||||||||| || |||||||| Sbjct 140592 CATCGCCGGCACCAACGGAAACTCCAACGGCATTGTCCCTATGCTCCGAGTTTTCAACAA 140651 Query 94134 CGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCT 94193 | | || | || || || || |||||| | | | ||| ||||||| | || || Sbjct 140652 CACCGCCAGATATGTTGATCAAGGTGGTAATAAGCGACCTGGTGCTTTCGCTATTTACCT 140711 Query 94194 CGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGA 94253 || || ||||| || ||||| | || | || ||||| ||||| || ||||| || Sbjct 140712 TGAACCATGGCATGCTGACGTTTTCGAGTTTCTTGATCTGCGCAAGAATCATGGCAAGGA 140771 Query 94254 TCTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAACG 94313 | | || | || ||||||||||| | ||| | || || || |||||||| || Sbjct 140772 AGAAGTTCGTGCACGTGATCTCTTCTACGCCTTGTGGATTCCTGATCTATTTATGAAGCG 140831 Query 94314 CGTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTCCGA 94373 || || || || | |||| |||| | || ||||| |||||||| || || | || Sbjct 140832 TGTTGAAAAGAATGGAGAGTGGACTCTTATGTGCCCCAACGAATGTCCGGGTTTGGCAGA 140891 Query 94374 CGTTTGTGGATCG-CGTTTTGAAGACT-TGTATGCTCGTTACGAATCGCAGGGCAAGGCC 94431 |||| ||| || | || || || | |||| ||||||| | ||||||| Sbjct 140892 TGTTTATGG--CGAAGAGTTCGAGGCTCTCTATGAGAGTTACGAGAAGGCTGGCAAGGGT 140949 Query 94432 AGGAAGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGAGACG 94491 | ||| ||| | ||| ||||| ||| | || | || | || |||||| Sbjct 140950 CGCAAGACTATCAAGGCTCAAAAGCTTTGGTACTCTATTCTCGAGGCCCAAACCGAGACG 141009 Query 94492 GGTACGCCCTACATCTTGTTCAAGGACTCTGTCAACGCCAAGTCCAACCAGCAGCACCTC 94551 || | || | ||| | | ||| || | |||| ||| ||||| || |||| Sbjct 141010 GGAAATCCTTTCATGCTTTACAAAGATGCATGCAACAAGAAGAGTAACCAAAAGAACCTT 141069 Query 94552 GGGGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGACGAG 94611 || || ||||| || | ||||| |||||||||||||| || | || || ||| Sbjct 141070 GGTACTATTCGCAGCTCCAACTTATGCACAGAGATTGTCGAGTACTCTGCGCCAGATGAG 141129 Query 94612 ATTGCTGTGTGTAACCTGGGCTCCATC 94638 ||||| |||||| ||| || ||| Sbjct 141130 GTTGCTTGTTGTAACTTGGCTTCTATC 141156 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494720077059800