Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monilinia_20aucupariae_20[genbank_20GCA_5F002162555.1_202017-05-31] 505 sequences; 54,948,206 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq17 147 2e-30 seq27 107 2e-18 seq1 84.2 2e-11 >seq17 Length=1064257 Score = 147 bits (162), Expect = 2e-30 Identities = 171/231 (74%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || | ||||||||||| || | || ||||| ||||| || ||||| ||| Sbjct 789777 CCACCACGGAGACGCAACACCAAGTGAAGGGTGGACTCCTTTTGGATGTTGTAGTCGGAA 789718 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | || || ||| || || || ||||||||| ||||||||||||| || ||||| || Sbjct 789717 AGAGTACGGCCATCCTCAAGTTGCTTTCCAGCGAAGATCAATCGCTGTTGGTCGGGTGGG 789658 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066 || |||||||||||| ||| || ||||| | |||| |||||||| | ||| || Sbjct 789657 ATTCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATGGTGTCCGAAGACTCAACC 789598 Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATGGCT 127117 |||| ||| | |||||||| || || || || || || ||||||||| || Sbjct 789597 TCGAGGGTGATGGTTTTGCCCGTAAGGGTCTTGACGAAGATCTGCATGACT 789547 >seq27 Length=788475 Score = 107 bits (118), Expect = 2e-18 Identities = 154/217 (71%), Gaps = 0/217 (0%) Strand=Plus/Minus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || | || || ||||| || | || ||||| || ||||||||||| ||| Sbjct 515999 CCACCACGAAGTCTCAGGACCAAGTGAAGGGTCGACTCCTTCTGAATATTGTAGTCGGAG 515940 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | || ||| ||| || || || ||||| ||| | ||||| ||||| |||||||| || Sbjct 515939 AGGGTACGACCATCCTCAAGTTGCTTTCCGGCGAAAATCAAACGCTGTTGATCGGGTGGG 515880 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066 || |||||||| || ||| || ||||| | |||| |||||| | | |||||| Sbjct 515879 ATACCCTCCTTATCTTGGATCTTTGACTTGACATTATCGATGGTGTCAGAAGATTCGACT 515820 Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAA 127103 || | ||| | || || ||||| || || || |||| Sbjct 515819 TCAAGGGTGATGGTCTTTCCGGTGAGGGTCTTGACAA 515783 >seq1 Length=6243313 Score = 84.2 bits (92), Expect = 2e-11 Identities = 126/179 (70%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 126926 TTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATC 126985 ||||| || |||||||| | || || || || || || ||||||||| ||||| Sbjct 2454774 TTTTGGATGTTGTAATCTGAGAGAGTACGTCCGTCCTCAAGTTGCTTTCCAGCGAAGATC 2454715 Query 126986 AATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCG 127045 || || || ||||||||||| || |||||||||||| ||| || ||||| | || Sbjct 2454714 AAACGTTGTTGATCGGGAGGAATTCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCA 2454655 Query 127046 ACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAA 127104 | |||||| | |||||| || | ||| | || ||||| || || || || || || Sbjct 2454654 ATGGTGTCAGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTAAGGGTCTTGACGAA 2454596 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475497798401200