Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monilinia_20aucupariae_20[genbank_20GCA_5F002162555.1_202017-05-31] 505 sequences; 54,948,206 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq17 95.1 1e-14 seq27 82.4 7e-11 >seq17 Length=1064257 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 45114 CCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTG 45173 || || ||||| | |||||| | || || || || ||||||||||| || || ||| Sbjct 789777 CCACCACGGAGACGCAACACCAAGTGAAGGGTGGACTCCTTTTGGATGTTGTAGTCGGAA 789718 Query 45174 ACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGA 45233 | || ||| || | ||| ||||| ||| | |||||||| || ||||| || || Sbjct 789717 AGAGTACGGCCATCCTCAAGTTGCTTTCCAGCGAAGATCAATCGCTGTTGGTCGGGTGGG 789658 Query 45234 ATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACT 45293 || || || || || || || || |||| || | |||||| |||||||| || Sbjct 789657 ATTCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATGGTGTCCGAAGACTCAACC 789598 Query 45294 TCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 ||||| || | |||||||| || || || || || || || ||||| Sbjct 789597 TCGAGGGTGATGGTTTTGCCCGTAAGGGTCTTGACGAAGATCTGCAT 789551 >seq27 Length=788475 Score = 82.4 bits (90), Expect = 7e-11 Identities = 135/192 (70%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 45150 TCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTAT 45209 |||||||| || || |||||| | |||| | || ||||| || |||||||| | Sbjct 516419 TCCTTTTGAATGTTGTAATCGGAAAGGGTTCTGCCGTCCTCCAACTGCTTTCCTGCAAAG 516360 Query 45210 ATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT 45269 ||||||||||| ||||| || ||||| || || || || || || || |||| || | Sbjct 516359 ATCAATCGTTGTTGGTCAGGTGGAATACCCTCCTTGTCCTGGATCTTCGACTTGA-CGTT 516301 Query 45270 -TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTAC 45328 || | || || || || || ||||| | |||| || || || || | || || || Sbjct 516300 ATCAATAGTATCTGACGATTCTACTTCTAACGTAATTGTCTTACCAGTCAAGGTCTTGAC 516241 Query 45329 AAAAATTTGCAT 45340 ||| |||||||| Sbjct 516240 AAAGATTTGCAT 516229 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 452000346729800