Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Monilinia_20aucupariae_20[genbank_20GCA_5F002162555.1_202017-05-31]
505 sequences; 54,948,206 total letters
Query= NC_012639.1
Length=141291
Score E
Sequences producing significant alignments: (Bits) Value
seq17 95.1 1e-14
seq27 82.4 7e-11
>seq17
Length=1064257
Score = 95.1 bits (104), Expect = 1e-14
Identities = 157/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 45114 CCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTG 45173
|| || ||||| | |||||| | || || || || ||||||||||| || || |||
Sbjct 789777 CCACCACGGAGACGCAACACCAAGTGAAGGGTGGACTCCTTTTGGATGTTGTAGTCGGAA 789718
Query 45174 ACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGA 45233
| || ||| || | ||| ||||| ||| | |||||||| || ||||| || ||
Sbjct 789717 AGAGTACGGCCATCCTCAAGTTGCTTTCCAGCGAAGATCAATCGCTGTTGGTCGGGTGGG 789658
Query 45234 ATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACT 45293
|| || || || || || || || |||| || | |||||| |||||||| ||
Sbjct 789657 ATTCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATGGTGTCCGAAGACTCAACC 789598
Query 45294 TCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
||||| || | |||||||| || || || || || || || |||||
Sbjct 789597 TCGAGGGTGATGGTTTTGCCCGTAAGGGTCTTGACGAAGATCTGCAT 789551
>seq27
Length=788475
Score = 82.4 bits (90), Expect = 7e-11
Identities = 135/192 (70%), Gaps = 2/192 (1%)
Strand=Plus/Minus
Query 45150 TCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTAT 45209
|||||||| || || |||||| | |||| | || ||||| || |||||||| |
Sbjct 516419 TCCTTTTGAATGTTGTAATCGGAAAGGGTTCTGCCGTCCTCCAACTGCTTTCCTGCAAAG 516360
Query 45210 ATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT 45269
||||||||||| ||||| || ||||| || || || || || || || |||| || |
Sbjct 516359 ATCAATCGTTGTTGGTCAGGTGGAATACCCTCCTTGTCCTGGATCTTCGACTTGA-CGTT 516301
Query 45270 -TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTAC 45328
|| | || || || || || ||||| | |||| || || || || | || || ||
Sbjct 516300 ATCAATAGTATCTGACGATTCTACTTCTAACGTAATTGTCTTACCAGTCAAGGTCTTGAC 516241
Query 45329 AAAAATTTGCAT 45340
||| ||||||||
Sbjct 516240 AAAGATTTGCAT 516229
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 452000346729800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |