Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Monilinia_20aucupariae_20[genbank_20GCA_5F002162555.1_202017-05-31]
505 sequences; 54,948,206 total letters
Query= NC_013772.1
Length=176677
Score E
Sequences producing significant alignments: (Bits) Value
seq17 132 5e-26
seq27 111 2e-19
>seq17
Length=1064257
Score = 132 bits (146), Expect = 5e-26
Identities = 159/216 (74%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 46378 ACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTC 46437
||||||||||| || | || |||||||||||| ||||||||||| ||||| || |
Sbjct 789766 ACGCAACACCAAGTGAAGGGTGGACTCCTTTTGGATGTTGTAGTCGGAAAGAGTACGGCC 789707
Query 46438 GTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTT 46497
|| || || ||||| || ||||| ||||| ||||| ||||||| || | | ||||||
Sbjct 789706 ATCCTCAAGTTGCTTTCCAGCGAAGATCAATCGCTGTTGGTCGGGTGGGATTCCCTCCTT 789647
Query 46498 GTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGAT 46557
|||| |||||| ||||| | | | ||||| || || || || | |||||
Sbjct 789646 GTCCTGGATCTTGGACTTGACATTGTCGATGGTGTCCGAAGACTCAACCTCGAGGGTGAT 789587
Query 46558 GGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593
|||||||||||| || || || || ||||| |||||
Sbjct 789586 GGTTTTGCCCGTAAGGGTCTTGACGAAGATCTGCAT 789551
>seq27
Length=788475
Score = 111 bits (122), Expect = 2e-19
Identities = 154/216 (71%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 46378 ACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTC 46437
||| | ||||| |||| || ||||||||||| || ||||| ||||| || || | |
Sbjct 516444 ACGGAGCACCAAGTGCAGGGTGCTCTCCTTTTGAATGTTGTAATCGGAAAGGGTTCTGCC 516385
Query 46438 GTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTT 46497
||| || | |||||| || || || ||||| || || ||||| | || | | ||||||
Sbjct 516384 GTCCTCCAACTGCTTTCCTGCAAAGATCAATCGTTGTTGGTCAGGTGGAATACCCTCCTT 516325
Query 46498 GTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGAT 46557
|||| ||||||| ||||| | | | || || |||||| || || | ||| ||
Sbjct 516324 GTCCTGGATCTTCGACTTGACGTTATCAATAGTATCTGACGATTCTACTTCTAACGTAAT 516265
Query 46558 GGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593
|| || || |||| || || ||||||||||||||
Sbjct 516264 TGTCTTACCAGTCAAGGTCTTGACAAAGATTTGCAT 516229
Score = 89.7 bits (98), Expect = 6e-13
Identities = 129/182 (71%), Gaps = 0/182 (0%)
Strand=Plus/Minus
Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461
|||||| || |||||||||||||| || || || | || || || ||||| ||||||||
Sbjct 515964 CTCCTTCTGAATATTGTAGTCGGAGAGGGTACGACCATCCTCAAGTTGCTTTCCGGCGAA 515905
Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521
||||| ||||| || |||| || | | |||||| || |||||| ||||| |
Sbjct 515904 AATCAAACGCTGTTGATCGGGTGGGATACCCTCCTTATCTTGGATCTTTGACTTGACATT 515845
Query 46522 CGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAAC 46581
| | ||||| ||||| || || | |||||||| || || || || || || ||
Sbjct 515844 ATCGATGGTGTCAGAAGATTCGACTTCAAGGGTGATGGTCTTTCCGGTGAGGGTCTTGAC 515785
Query 46582 AA 46583
||
Sbjct 515784 AA 515783
Score = 84.2 bits (92), Expect = 2e-11
Identities = 144/209 (69%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 46385 ACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCG 46444
|||| ||| || ||| ||||||||||| |||||||| || | ||||| | || ||
Sbjct 516209 ACCAAATGTAAGGTAGATTCCTTTTGGATGTTGTAGTCTGACAACGTGCGGCCATCTTCA 516150
Query 46445 AGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 46504
|||||||| || || || || | ||||| || || | || | | |||||| ||
Sbjct 516149 AGCTGCTTACCAGCAAAGATAAGACGCTGTTGATCAGGTGGAATACCCTCCTTATCTTGA 516090
Query 46505 ATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTG 46564
||||| |||| | | | ||| || || || || |||| |||||||| ||
Sbjct 516089 ATCTTAGATTTGACATTGTCGATCGTATCCGATGACTCAACCTCCAAAGTGATGGTCTTT 516030
Query 46565 CCCGTCAGCGTTTTAACAAAGATTTGCAT 46593
|| |||| || ||||| |||||||||||
Sbjct 516029 CCAGTCAAGGTCTTAACGAAGATTTGCAT 516001
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 565234831932600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |