Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monilinia_20aucupariae_20[genbank_20GCA_5F002162555.1_202017-05-31] 505 sequences; 54,948,206 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq17 132 5e-26 seq27 111 2e-19 >seq17 Length=1064257 Score = 132 bits (146), Expect = 5e-26 Identities = 159/216 (74%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 46378 ACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTC 46437 ||||||||||| || | || |||||||||||| ||||||||||| ||||| || | Sbjct 789766 ACGCAACACCAAGTGAAGGGTGGACTCCTTTTGGATGTTGTAGTCGGAAAGAGTACGGCC 789707 Query 46438 GTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTT 46497 || || || ||||| || ||||| ||||| ||||| ||||||| || | | |||||| Sbjct 789706 ATCCTCAAGTTGCTTTCCAGCGAAGATCAATCGCTGTTGGTCGGGTGGGATTCCCTCCTT 789647 Query 46498 GTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGAT 46557 |||| |||||| ||||| | | | ||||| || || || || | ||||| Sbjct 789646 GTCCTGGATCTTGGACTTGACATTGTCGATGGTGTCCGAAGACTCAACCTCGAGGGTGAT 789587 Query 46558 GGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 |||||||||||| || || || || ||||| ||||| Sbjct 789586 GGTTTTGCCCGTAAGGGTCTTGACGAAGATCTGCAT 789551 >seq27 Length=788475 Score = 111 bits (122), Expect = 2e-19 Identities = 154/216 (71%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 46378 ACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTC 46437 ||| | ||||| |||| || ||||||||||| || ||||| ||||| || || | | Sbjct 516444 ACGGAGCACCAAGTGCAGGGTGCTCTCCTTTTGAATGTTGTAATCGGAAAGGGTTCTGCC 516385 Query 46438 GTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTT 46497 ||| || | |||||| || || || ||||| || || ||||| | || | | |||||| Sbjct 516384 GTCCTCCAACTGCTTTCCTGCAAAGATCAATCGTTGTTGGTCAGGTGGAATACCCTCCTT 516325 Query 46498 GTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGAT 46557 |||| ||||||| ||||| | | | || || |||||| || || | ||| || Sbjct 516324 GTCCTGGATCTTCGACTTGACGTTATCAATAGTATCTGACGATTCTACTTCTAACGTAAT 516265 Query 46558 GGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || || || |||| || || |||||||||||||| Sbjct 516264 TGTCTTACCAGTCAAGGTCTTGACAAAGATTTGCAT 516229 Score = 89.7 bits (98), Expect = 6e-13 Identities = 129/182 (71%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| || |||||||||||||| || || || | || || || ||||| |||||||| Sbjct 515964 CTCCTTCTGAATATTGTAGTCGGAGAGGGTACGACCATCCTCAAGTTGCTTTCCGGCGAA 515905 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 ||||| ||||| || |||| || | | |||||| || |||||| ||||| | Sbjct 515904 AATCAAACGCTGTTGATCGGGTGGGATACCCTCCTTATCTTGGATCTTTGACTTGACATT 515845 Query 46522 CGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAAC 46581 | | ||||| ||||| || || | |||||||| || || || || || || || Sbjct 515844 ATCGATGGTGTCAGAAGATTCGACTTCAAGGGTGATGGTCTTTCCGGTGAGGGTCTTGAC 515785 Query 46582 AA 46583 || Sbjct 515784 AA 515783 Score = 84.2 bits (92), Expect = 2e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 46385 ACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCG 46444 |||| ||| || ||| ||||||||||| |||||||| || | ||||| | || || Sbjct 516209 ACCAAATGTAAGGTAGATTCCTTTTGGATGTTGTAGTCTGACAACGTGCGGCCATCTTCA 516150 Query 46445 AGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 46504 |||||||| || || || || | ||||| || || | || | | |||||| || Sbjct 516149 AGCTGCTTACCAGCAAAGATAAGACGCTGTTGATCAGGTGGAATACCCTCCTTATCTTGA 516090 Query 46505 ATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTG 46564 ||||| |||| | | | ||| || || || || |||| |||||||| || Sbjct 516089 ATCTTAGATTTGACATTGTCGATCGTATCCGATGACTCAACCTCCAAAGTGATGGTCTTT 516030 Query 46565 CCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || |||| || ||||| ||||||||||| Sbjct 516029 CCAGTCAAGGTCTTAACGAAGATTTGCAT 516001 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 565234831932600