Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monilinia_20aucupariae_20[genbank_20GCA_5F002162555.1_202017-05-31] 505 sequences; 54,948,206 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq3 129 6e-25 seq17 123 2e-23 seq27 109 5e-19 seq1 96.9 3e-15 >seq3 Length=2715537 Score = 129 bits (142), Expect = 6e-25 Identities = 348/519 (67%), Gaps = 14/519 (3%) Strand=Plus/Plus Query 132604 TTTTGATATTCGCCCACCTTTTTCTCaaaaaaaTTAGTTTTTCCCTCCAAGGAAATGAGC 132663 ||||| || || || || | ||||| ||||| || ||||| || |||| || ||| | Sbjct 2405376 TTTTGGTAATCACCAACTCTCTTCTCGAAAAAGTTGGTTTTGCCGGCCAATGAGATGTTC 2405435 Query 132664 GTCATAAAATCCAAGGGGTTGGCTGTGTTGTAG---TGCTTGGTGCCGATCAGGTCGACG 132720 ||| ||||| || |||||||| | |||| | || | |||| | || ||| | Sbjct 2405436 TCCATGAAATCGAATGGGTTGGCAGACCTGTAAAATTTCTCGTTGCCCAA-AG--CGATG 2405492 Query 132721 AGCAGCCTGTCGGCCACGAACTCGATGTATTGCGACATG-GTTTCGCAATTAAGTCCCAG 132779 || || | || || |||||||||||||||||| |||| | ||||| | | | | || Sbjct 2405493 AGAAGACGATCAGCAACGAACTCGATGTATTGCTTCATGAGATTCGCGTTCATGCCTAAG 2405552 Query 132780 CAGACGCACC-GGCAGCGCTTCGGTGAGAAAGCGTTGCTCGATGGCGACCGCGTCGGTGA 132838 ||| |||| || || || ||||| | || ||||||||| |||| || || |||| Sbjct 2405553 -AGA-GCACATGGAAGAGCCTCGGTCAAGAATTCTTGCTCGATTTCGACGGCTTCAGTGA 2405610 Query 132839 CGATTTCCCTAACG-CGCGCCGCGCTCGGCCGTTGCACCAAATGCTTGAACATCAAGCAA 132897 || || |||| | || | | ||| || || | ||| || | | ||| Sbjct 2405611 TGACATCTTGAACGGCTTGCTTGGATGGGCGGT-GCTTGAGATGGGAAAAGAGGAGGCAT 2405669 Query 132898 GCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAAGCCG 132957 || |||||| || | || ||||| | ||| |||||||||||| |||||| | ||| Sbjct 2405670 GCGAAGTCGGTGTGGAGACCTTCGTCACGGGAGATGAGTTCGTTGGAGAAAGTAAGTCCG 2405729 Query 132958 GGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGCCCGAAAAGAAGACG 133017 | |||||| || || || |||||||| || || | ||||| || || ||||| | Sbjct 2405730 GCCATGAGACCACGCTTCTTGAGCCAGAAGATAGATGCGAAGGATCCGGAGAAGAAAATA 2405789 Query 133018 CCCTCGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAACGT-GGCTTCTTTGCTGGCGAT 133076 || || ||||| ||||| || || || || | | || || | ||||| || | || Sbjct 2405790 CCTTCAACGGCAGCGAATGCGACGAGACGTTGAGCAAAGGTAGAGTTCTTGTCTTG-AAT 2405848 Query 133077 CCAGCGCAGCGCCCATTCGGCCTTTTCTTTGACGCACGG 133115 ||| | ||||| |||||||| | ||| | ||| || Sbjct 2405849 CCACTTGACAGCCCAGTCGGCCTTCTTTTTAATGCAAGG 2405887 Score = 107 bits (118), Expect = 2e-18 Identities = 189/275 (69%), Gaps = 3/275 (1%) Strand=Plus/Plus Query 133168 TAGGTGTCGATGAGGGTCGAATACATTTCCGAGTGTACGTTCTCCATGGCGATTTGAAAG 133227 || ||||||||||| || || |||| || || | ||||||||| |||||| || Sbjct 2405999 TATGTGTCGATGAGAAGAGAGTATGTTTCAGAATGAATGTTCTCCATCATGATTTGGAAA 2406058 Query 133228 CCGTAAAAGCACCGCGCCTCGACCACCTGCACTTCTTGAGCGAAACGCTCGACCAGATTT 133287 ||||| ||||| | ||||| | || ||||| | ||| ||||| |||| || Sbjct 2406059 CCGTAGAAGCATCTTGCCTCTGGGATTTGAACTTCACCACTGAATCGCTCTACCAAGTTC 2406118 Query 133288 TCGTTGACGATGCCGTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTGATGAAATGGCGC 133347 || ||||| || ||||| || ||||| || || || |||||| |||||| | |||| Sbjct 2406119 TCATTGACAATTCCGTCAGATGCTGCGAAGAATGCGAGAACGTGCGAGATGAAGTAGCGC 2406178 Query 133348 TCGTTGTCGTTCA---AGCGCTCCCAGTCGCGCGTGTCCTTGGACAGGTCCACCTCCTCG 133404 || | || || | | | ||||||| | ||||| |||| || | ||| || Sbjct 2406179 TCATCATCATTGAGTCTGTTGTTCCAGTCGTGAAGATCCTTTGACAAATCGATCTCTTCT 2406238 Query 133405 ACGGTCCAAAACGACGCCTCGGCTTTTTTGTACAT 133439 ||||||| || || ||||| || || |||||||| Sbjct 2406239 GCGGTCCAGAAAGATGCCTCTGCCTTCTTGTACAT 2406273 >seq17 Length=1064257 Score = 123 bits (136), Expect = 2e-23 Identities = 157/216 (73%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || || |||||||||||||||||| |||| || ||| | | Sbjct 789551 ATGCAGATCTTCGTCAAGACCCTTACGGGCAAAACCATCACCCTCGAGGTTGAGTCTTCG 789610 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | | | | || || |||| ||||| |||||||| || |||||||| Sbjct 789611 GACACCATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGAATCCCACCCGACCAA 789670 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||||| | || | ||| || || || || || || | || || || |||||||||| Sbjct 789671 CAGCGATTGATCTTCGCTGGAAAGCAACTTGAGGATGGCCGTACTCTTTCCGACTACAAC 789730 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 ||||||||||| | || || || |||||| ||||| Sbjct 789731 ATCCAAAAGGAGTCCACCCTTCACTTGGTGTTGCGT 789766 >seq27 Length=788475 Score = 109 bits (120), Expect = 5e-19 Identities = 141/192 (73%), Gaps = 2/192 (1%) Strand=Plus/Plus Query 38268 ACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTGCA-AACGCTTAAAGA 38326 || ||||| || |||||| | || ||||| ||| ||| | | | | |||| | || Sbjct 515514 ACTGGCAAGACTATCACCCTTGAGGTCGAATCCAGCGATACCATTGACAACG-TCAAGTC 515572 Query 38327 AAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGCAA 38386 ||| |||| || || |||||||||||| ||||||||||||| | |||| ||| || || Sbjct 515573 AAAGATCCAAGATAAGGAGGGAATTCCCCCCGACCAACAGCGTTTGATTTTCGCCGGAAA 515632 Query 38387 ACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCTGCA 38446 || || || || | |||||| | | ||||||||||| |||||||| | ||||| || Sbjct 515633 GCAACTTGAGGATGGTCGCACCTTGAGTGACTACAACATTCAAAAGGAGTCTACGCTCCA 515692 Query 38447 TTTGGTGCTGCG 38458 | | ||||| || Sbjct 515693 TCTTGTGCTCCG 515704 >seq1 Length=6243313 Score = 96.9 bits (106), Expect = 3e-15 Identities = 130/181 (72%), Gaps = 0/181 (0%) Strand=Plus/Plus Query 38253 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTG 38312 ||||| || || || |||||||| ||||||||| | || |||||| || | |||| | | Sbjct 2454596 TTCGTCAAGACCCTTACGGGCAAGACCATCACCCTTGAGGTCGAGTCCTCTGACACCATT 2454655 Query 38313 CAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTC 38372 | | | || || |||| ||||| ||||||||||| |||| ||||| || | Sbjct 2454656 GACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGAATTCCTCCCGATCAACAACGTTTG 2454715 Query 38373 ATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAG 38432 || | ||| || || || || || |||| || || ||| || ||||||||||||||| Sbjct 2454716 ATCTTCGCTGGAAAGCAACTTGAGGACGGACGTACTCTCTCAGATTACAACATCCAAAAG 2454775 Query 38433 G 38433 | Sbjct 2454776 G 2454776 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500169642659200