Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monilinia_20aucupariae_20[genbank_20GCA_5F002162555.1_202017-05-31] 505 sequences; 54,948,206 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq60 116 1e-20 seq27 111 6e-19 seq1 105 3e-17 seq2 84.2 9e-11 >seq60 Length=53878 Score = 116 bits (128), Expect = 1e-20 Identities = 197/285 (69%), Gaps = 9/285 (3%) Strand=Plus/Minus Query 451320 ATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATG 451379 |||| || ||||||||||||| || ||||| ||| | ||||| ||||| ||||| |||| Sbjct 27939 ATGCCGTCGTTACTGTTCCCGCATACTTCAACGATTCCCAACGTCAAGCTACTAAGGATG 27880 Query 451380 CAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTC 451439 | || || ||||| ||||| || || || || || | ||||| || || || ||||||| Sbjct 27879 CTGGTCAAATTGCCGGTTTGAACGTCCTCAGAGTTGTCAATGAGCCAACTGCTGCTGCTC 27820 Query 451440 TAGCATATGGACTAGGAAAATCAAAAGAAACAGAAGaaaaaaaTATTTTAGTATTTGATT 451499 | || || || | ||| || | || || || | || || | |||| Sbjct 27819 TCGCTTACGG-TTTGGAGAAGGA--------TGAGGACAAGATCATCGCCGTTTACGATT 27769 Query 451500 TTGGTGGAGGAACTCATGATACTTCTGTACTTTCAATTGAAGATGGGGTATTTGAAGTAA 451559 | || ||||| || |||| ||| || || || || | || || || ||||| | Sbjct 27768 TGGGCGGAGGTACCTTCGATATTTCCGTTCTCGAGATCCAAAAGGGTGTCTTCGAAGTCA 27709 Query 451560 AGGCAACCAATGGTGATACTCATCTAGGAGGTGAAGATATTGATA 451604 | | ||||| ||||||||||| | |||||||||||| | |||| Sbjct 27708 AATCTACCAACGGTGATACTCACTTGGGAGGTGAAGATTTCGATA 27664 >seq27 Length=788475 Score = 111 bits (122), Expect = 6e-19 Identities = 148/206 (72%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 391062 GTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCTGATAACATTGAA 391121 || || || || || || || || || || ||||| || ||||| ||||| | ||| || Sbjct 515785 GTCAAGACCCTCACCGGAAAGACCATCACCCTTGAAGTCGAATCTTCTGACACCATCGAT 515844 Query 391122 GCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAACAACGTTTAATT 391181 | | || ||| || ||||||||||| || || || || |||||||| ||||| ||| Sbjct 515845 AATGTCAAGTCAAAGATCCAAGATAAGGAGGGTATCCCACCCGATCAACAGCGTTTGATT 515904 Query 391182 TTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAATATTGATAAGGAT 391241 ||| | || || |||||||| ||||| | || | | || || |||||| | ||||| Sbjct 515905 TTCGCCGGAAAGCAACTTGAGGATGGTCGTACCCTCTCCGACTACAATATTCAGAAGGAG 515964 Query 391242 GCAACACTTCACTTAGTATTAAGACT 391267 | || |||||||| || | ||||| Sbjct 515965 TCGACCCTTCACTTGGTCCTGAGACT 515990 Score = 111 bits (122), Expect = 6e-19 Identities = 139/191 (73%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | || |||||||| || ||||||| || || || ||| | || ||||| ||||| Sbjct 516001 ATGCAAATCTTCGTTAAGACCTTGACTGGAAAGACCATCACTTTGGAGGTTGAGTCATCG 516060 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 |||| || || | | ||| || |||||||||||||| || ||||| ||||||||| Sbjct 516061 GATACGATCGACAATGTCAAATCTAAGATTCAAGATAAGGAGGGTATTCCACCTGATCAA 516120 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 || ||| | || || | || || || ||||||||||| | || ||| | || || || Sbjct 516121 CAGCGTCTTATCTTTGCTGGTAAGCAGCTTGAAGATGGCCGCACGTTGTCAGACTACAAC 516180 Query 391230 ATTGATAAGGA 391240 || | ||||| Sbjct 516181 ATCCAAAAGGA 516191 Score = 102 bits (112), Expect = 3e-16 Identities = 124/169 (73%), Gaps = 0/169 (0%) Strand=Plus/Plus Query 391072 TGACTGGTAAAACTATTACTCTTGATGTTGAATCATCTGATAACATTGAAGCTATTAAAC 391131 ||||||| || ||||| || ||||| || ||||| |||| |||||| | || Sbjct 515512 TGACTGGCAAGACTATCACCCTTGAGGTCGAATCCAGCGATACCATTGACAACGTCAAGT 515571 Query 391132 AAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAACAACGTTTAATTTTCTCAGGGA 391191 ||| || ||||||||||| |||||||| || || ||||| ||||| |||||| | || | Sbjct 515572 CAAAGATCCAAGATAAGGAGGGAATTCCCCCCGACCAACAGCGTTTGATTTTCGCCGGAA 515631 Query 391192 AACAACTTGAAGATGGAAGAACTTTGGCGGATTATAATATTGATAAGGA 391240 | |||||||| ||||| | || ||| || || || ||| | ||||| Sbjct 515632 AGCAACTTGAGGATGGTCGCACCTTGAGTGACTACAACATTCAAAAGGA 515680 >seq1 Length=6243313 Score = 105 bits (116), Expect = 3e-17 Identities = 143/198 (72%), Gaps = 1/198 (1%) Strand=Plus/Plus Query 391042 ATATTATAATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTG 391101 |||| |||| |||| ||||| || || || || || || || || || ||||| || | Sbjct 2454580 ATATAATAAC-AATAGCTTCGTCAAGACCCTTACGGGCAAGACCATCACCCTTGAGGTCG 2454638 Query 391102 AATCATCTGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTC 391161 | || ||||| | |||||| | | || || || || || ||||| |||||||||| Sbjct 2454639 AGTCCTCTGACACCATTGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGAATTCCTC 2454698 Query 391162 CTGATCAACAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGG 391221 | |||||||||||||| || ||| | || || |||||||| || ||| | ||| | | | Sbjct 2454699 CCGATCAACAACGTTTGATCTTCGCTGGAAAGCAACTTGAGGACGGACGTACTCTCTCAG 2454758 Query 391222 ATTATAATATTGATAAGG 391239 |||| || || | |||| Sbjct 2454759 ATTACAACATCCAAAAGG 2454776 >seq2 Length=2834403 Score = 84.2 bits (92), Expect = 9e-11 Identities = 135/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 451847 CCTGTTGATCAAGTATTACATGATTCTAAAATTAGTAAAGATAAAATTGATGAAATTGTG 451906 ||||||| ||| || | | ||| | || ||| ||| || |||| || ||||| Sbjct 2395729 CCTGTTGCTCAGGTTCTCAAGGATGCCAACATTGATAAGACCAAGGTTGACGAGATTGTC 2395670 Query 451907 CTTGTAGGAGGTTCTACACGAATTCCTAAAATTCAAGATATGTTGTCTTCTTATTTTGGA 451966 ||||| || |||||||| || || || | ||||||| | | ||| | | |||| Sbjct 2395669 CTTGTCGGTGGTTCTACCCGTATCCCAAGAATTCAAAAGCTCTTGAGTGAGTTCTTTGAT 2395610 Query 451967 GGAAAACAACTATGTAAGAGCGTAAATCCTGATGAAGCTGTTGCATATGGTGCTGCAGTT 452026 ||||| | | |||||| | || |||||||| ||||||||||| ||||| || ||| Sbjct 2395609 GGAAAGAAGTTGGAGAAGAGCATCAACCCTGATGAGGCTGTTGCATACGGTGCCGCCGTT 2395550 Query 452027 CAAGCAGCTATTCT 452040 ||||| | ||| || Sbjct 2395549 CAAGCTGGTATCCT 2395536 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1975705616484540