Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monilinia_20aucupariae_20[genbank_20GCA_5F002162555.1_202017-05-31] 505 sequences; 54,948,206 total letters Query= NC_014649.1 Length=1181549 Score E Sequences producing significant alignments: (Bits) Value seq27 168 5e-36 seq2 123 2e-22 seq60 107 1e-17 seq1 98.7 8e-15 >seq27 Length=788475 Score = 168 bits (186), Expect = 5e-36 Identities = 478/729 (66%), Gaps = 4/729 (1%) Strand=Plus/Plus Query 517984 TTTTCTCTTGAAATCTTCAACACACCATGTTACAAGACGATTATCAAAATCTTCACCTCC 518043 |||||| ||||| ||| | ||| | | ||||| | || || || |||||||| || Sbjct 605752 TTTTCTTTTGAATTCTGCGACAAAGTGATTGACAAGTCTGTTGTCGAAGTCTTCACCACC 605811 Query 518044 CAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTTCAAGAGACAAAAG 518103 ||| | ||| | || | || | | || | ||| | || || || | | ||| || Sbjct 605812 CAAGTGAGTGTCACCGGCGGTGGACTTGACCTCGAAGATACCCTCCTCGATGGTCAAGAG 605871 Query 518104 AGTTACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTTGTCTTG 518163 || ||||| ||||| ||||| | ||| || || || || || || || Sbjct 605872 AGAGACATCGAAAGTTCCTCCACCAAGATCGAAGATGAGAACGTTACGCTCACCCTCAAT 605931 Query 518164 GTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAAC 518223 || || || | ||| || |||| ||||| || || || || || || || | | ||| Sbjct 605932 CTTCTTGTCCAAACCGTAAGCAATGGCAGCTGCGGTAGGCTCGTTGATGATACGGAGAAC 605991 Query 518224 ATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATA 518283 |||||||||||||| || || || ||||||||||| | |||||||||| | || || Sbjct 605992 GTTAAGACCAGCAATGAGACCAGCGTCCTTAGTGGCTTGACGTTGTGAATCGGTGAAGTA 606051 Query 518284 TGCAGGAACAGTAATAACGGCATCAGTTACTTCTTTACCAATATAAGCGCTTGCCGTTTG 518343 || || || || | || || | | || | ||| | ||||| || || | Sbjct 606052 AGCTGGGACTGTGACGACAGCGTTGTTAACAGTTCCACCGAGGTAAGCCTCAGCAGTCTC 606111 Query 518344 TTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGGGGAATATTGCTTGGATTC-AT 518402 | |||| || || ||||| || || |||| |||||| | |||||||| || Sbjct 606112 TCTCATCTTGACCAAGATCATGGAAGAGATTTCTTCTGGTGTGAATTGCTTGTTCTCGCC 606171 Query 518403 TTTGATATGATACTTCAAAATATGGTTTATTACCAACATTAATAACTTTAAATGGCCAGT 518462 |||| | || || | ||| || |||| | ||| || || ||||| ||| Sbjct 606172 CTTGA-ACTCGACCTCGATGACTGGCTTTCCACCACGGTCAATGACCTTGAATGGGAAGT 606230 Query 518463 ATTTCATATCTGATTGAACACTTTG-GTCATTAAAATCTCTACCAATTAATCGTTTTGCA 518521 |||||||| | |||||| || | || || | | |||||| || || || ||| Sbjct 606231 GCTTCATATCGGCTTGAAC-CTCAGCATCTGCGAACTTGCGACCAATCAAACGCTTAGCA 606289 Query 518522 TCAAAAATAGTATTGGTTGGATTAATTGCAGCTTGATATTTGGCTGCATCTCCAATCAGA 518581 || || | || ||| |||| || || || |||||| ||||| |||||||| |||||| Sbjct 606290 TCGAAGACGGTGTTGATTGGGTTCATGGCGACTTGATTCTTGGCGGCATCTCCGATCAGA 606349 Query 518582 TGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTACCTTGATCATTCGCA 518641 | || || ||||| || | ||| | ||||| || || || || ||||| || || || Sbjct 606350 CGCTCGGTATCTGTGAAAGCAACGAAGGATGGGGTGGTACGGTTTCCTTGGTCGTTGGCG 606409 Query 518642 ATAATTTCAACTTTACCATTTTGCCATACACCTACACAACTAAAAGTTGTTCCTAAATCA 518701 |||||||| | | || ||| | | | ||| |||||| | || || || ||||| Sbjct 606410 ATAATTTCGATTCTATCATCACGGAAGATACCCACACAAGAGTAGGTGGTACCCAAATCG 606469 Query 518702 ATACCAATA 518710 ||||||||| Sbjct 606470 ATACCAATA 606478 Score = 118 bits (130), Expect = 8e-21 Identities = 258/384 (67%), Gaps = 3/384 (1%) Strand=Plus/Plus Query 517258 GGCAGTCACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGAC 517317 ||||| || || | || || |||||||| | ||| |||||||| ||||||||||| || Sbjct 604675 GGCAGAGACGTTCATGATTCCGTTGGCATCAAGATCGAATGTGACCTCAATTTGAGGAAC 604734 Query 517318 CCCTCTCTGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTT 517377 || | | ||||||||||| || | | ||| | |||| | || || || || Sbjct 604735 ACCACGTGGTGCAGGTGGGATACCAGTAAGCTCGAATTTGCCCAAAAGGTTGTTGTCCTT 604794 Query 517378 AGTGAATTTTCGTTCACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATA 517437 ||| || || ||||||||||| | |||||| || | | ||| || ||||| | Sbjct 604795 GGTGCGTTGACGCTCACCCTCGAAGACTTGGATGAGGACACCTGGTTGGTTGTCTGAGAA 604854 Query 517438 AGTTGTAAATACTCTGGATTTTTTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGT 517497 || | || || || || || || || || |||||||| ||| | ||||| Sbjct 604855 GGTGGAGAAGACCTCAGACTTCTTGGTTGGGATGGTAGTGTTTCTTGGAATGAGCTTGGT 604914 Query 517498 CATAATACCACCTGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAAT 517557 ||| ||||| || || || | ||||||||| | || | |||||| | |||| || Sbjct 604915 CATTTGTCCACCAGCAGTCTCGATACCAAGAGACAATGGGGCGACATCGAGAAGGAGGAT 604974 Query 517558 AT--TTTGAAGTTTTTCA-TCAGTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCACC 517614 | || | || || | ||| | |||| ||||| || || || | |||||||| Sbjct 604975 CTCGTTGGTAGACTTGGAGGAAGTGTCACCAGAGAGAATGGCAGCCTGGACGGCAGCACC 605034 Query 517615 ATATGCAACAGCTTCATCAGGATT 517638 ||||||||||| |||||||| || Sbjct 605035 GTATGCAACAGCCTCATCAGGGTT 605058 >seq2 Length=2834403 Score = 123 bits (136), Expect = 2e-22 Identities = 171/236 (72%), Gaps = 5/236 (2%) Strand=Plus/Minus Query 668849 TTAAGAGGTAAAGAAGGTCGTATTAGAGGAAATTTGATGGGAAAACGTGTCGATATGTCT 668908 ||||| ||||| || |||||| || | ||||||||||||||||| |||||||| | ||| Sbjct 1417717 TTAAG-GGTAAGGAGGGTCGTCTTCGTGGAAATTTGATGGGAAAGCGTGTCGACTTTTCT 1417659 Query 668909 GCACGTACAGTTATTACTTCTGATCCCAATATTGCTCTCAATGAAGTTGGTGTTCCTCTT 668968 || ||||| ||||||||| |||||||||| || | || |||| |||||||| |||| Sbjct 1417658 GCTCGTACTGTTATTACTGGTGATCCCAATCTTTCCCTGGATGAGGTTGGTGTCCCTCGA 1417599 Query 668969 ATTATTGCTAAAAATCTTACTTTTGACGAAATTGTAACAGAACATAATATTGAGTATTTG 669028 | |||||| | || || || | | || | ||| ||| || || || || | ||| Sbjct 1417598 AGTATTGCGAGAATCCTCACATATCCAGAGACTGTTACACCACTCAACATCGATAAATTG 1417539 Query 669029 ACTCAATTAGTGAAAAATGG--TAAAAGAGTATATCCGGGTGCCAATTTTGTAATC 669082 ||| | || || ||||| | | ||| |||| |||||||| | ||| ||| Sbjct 1417538 CATCAGCTCGTTAAGAATGGCCCAGATGAG--CATCCTGGTGCCAAATATGTCATC 1417485 Score = 86.0 bits (94), Expect = 5e-11 Identities = 112/154 (73%), Gaps = 1/154 (1%) Strand=Plus/Minus Query 671641 TGAG-GGTCTTGGACCTTTTGAATTTTTCTTCCAAGTAATGGCAGGTCGTGAAGGTATTA 671699 |||| ||||| |||| || || |||||||| | |||||| |||||||||||| | | Sbjct 1416283 TGAGAGGTCTCACACCTACAGAGTTCTTCTTCCACGCAATGGCTGGTCGTGAAGGTTTGA 1416224 Query 671700 TTAATACGGCTATTAAAACTGCTGATACTGGTTATATTCAAAGAAAACTTGTTAAAATGC 671759 | |||| || | || ||||| || ||||||||||||||| | ||||| ||| | Sbjct 1416223 TCGATACCGCAGTCAAGACTGCAGAAACTGGTTATATTCAACGTCGTCTTGTCAAAGCTC 1416164 Query 671760 TCGAAGATATCAAACAAGAATATGATGGTACAGT 671793 |||| ||| | | | ||||||| ||||| || Sbjct 1416163 TCGAGGATGTTATGGCAAAATATGACGGTACTGT 1416130 >seq60 Length=53878 Score = 107 bits (118), Expect = 1e-17 Identities = 107/139 (77%), Gaps = 0/139 (0%) Strand=Plus/Plus Query 518168 TTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTA 518227 || || | ||| || || | ||||||||||||||| ||||| | || ||| | || || Sbjct 27801 TTCTCCAAACCGTAAGCGAGAGCAGCAGCAGTTGGCTCATTGACAACTCTGAGGACGTTC 27860 Query 518228 AGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCA 518287 | ||| |||||| || ||||| ||||| ||||| | ||| |||||||| || ||||| Sbjct 27861 AAACCGGCAATTTGACCAGCATCCTTAGTAGCTTGACGTTGGGAATCGTTGAAGTATGCG 27920 Query 518288 GGAACAGTAATAACGGCAT 518306 |||||||||| ||||||| Sbjct 27921 GGAACAGTAACGACGGCAT 27939 >seq1 Length=6243313 Score = 98.7 bits (108), Expect = 8e-15 Identities = 104/137 (76%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 366982 AAAATAAAAATTGTAGTAGCCACAATAGCATTTGGTATGGGTATTAATAAACCGGATGTT 367041 || |||||| | ||||| || || ||||||||||||||||| ||| | || | | | || Sbjct 4573959 AACATAAAAGTCGTAGTCGCAACGATAGCATTTGGTATGGGAATTGACAAGCAGAACGTG 4573900 Query 367042 AGAGTTGTTATTCATTATGGAGCTCCCAAGAATATTGAAGGTTATTATCAAGAAATTGGT 367101 || |||| ||||||||| | |||||| | | | ||||| ||||| || |||| ||| Sbjct 4573899 CGATTTGTCATTCATTATTGCCTTCCCAAAACTTTAGAAGGCTATTACCAGGAAACTGGG 4573840 Query 367102 AGAGCAGGTCGTGATGG 367118 |||| ||||| ||||| Sbjct 4573839 CGAGCTGGTCGAGATGG 4573823 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3780797340236530