Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Monilinia_20aucupariae_20[genbank_20GCA_5F002162555.1_202017-05-31]
505 sequences; 54,948,206 total letters
Query= NC_014649.1
Length=1181549
Score E
Sequences producing significant alignments: (Bits) Value
seq27 168 5e-36
seq2 123 2e-22
seq60 107 1e-17
seq1 98.7 8e-15
>seq27
Length=788475
Score = 168 bits (186), Expect = 5e-36
Identities = 478/729 (66%), Gaps = 4/729 (1%)
Strand=Plus/Plus
Query 517984 TTTTCTCTTGAAATCTTCAACACACCATGTTACAAGACGATTATCAAAATCTTCACCTCC 518043
|||||| ||||| ||| | ||| | | ||||| | || || || |||||||| ||
Sbjct 605752 TTTTCTTTTGAATTCTGCGACAAAGTGATTGACAAGTCTGTTGTCGAAGTCTTCACCACC 605811
Query 518044 CAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTTCAAGAGACAAAAG 518103
||| | ||| | || | || | | || | ||| | || || || | | ||| ||
Sbjct 605812 CAAGTGAGTGTCACCGGCGGTGGACTTGACCTCGAAGATACCCTCCTCGATGGTCAAGAG 605871
Query 518104 AGTTACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTTGTCTTG 518163
|| ||||| ||||| ||||| | ||| || || || || || || ||
Sbjct 605872 AGAGACATCGAAAGTTCCTCCACCAAGATCGAAGATGAGAACGTTACGCTCACCCTCAAT 605931
Query 518164 GTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAAC 518223
|| || || | ||| || |||| ||||| || || || || || || || | | |||
Sbjct 605932 CTTCTTGTCCAAACCGTAAGCAATGGCAGCTGCGGTAGGCTCGTTGATGATACGGAGAAC 605991
Query 518224 ATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATA 518283
|||||||||||||| || || || ||||||||||| | |||||||||| | || ||
Sbjct 605992 GTTAAGACCAGCAATGAGACCAGCGTCCTTAGTGGCTTGACGTTGTGAATCGGTGAAGTA 606051
Query 518284 TGCAGGAACAGTAATAACGGCATCAGTTACTTCTTTACCAATATAAGCGCTTGCCGTTTG 518343
|| || || || | || || | | || | ||| | ||||| || || |
Sbjct 606052 AGCTGGGACTGTGACGACAGCGTTGTTAACAGTTCCACCGAGGTAAGCCTCAGCAGTCTC 606111
Query 518344 TTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGGGGAATATTGCTTGGATTC-AT 518402
| |||| || || ||||| || || |||| |||||| | |||||||| ||
Sbjct 606112 TCTCATCTTGACCAAGATCATGGAAGAGATTTCTTCTGGTGTGAATTGCTTGTTCTCGCC 606171
Query 518403 TTTGATATGATACTTCAAAATATGGTTTATTACCAACATTAATAACTTTAAATGGCCAGT 518462
|||| | || || | ||| || |||| | ||| || || ||||| |||
Sbjct 606172 CTTGA-ACTCGACCTCGATGACTGGCTTTCCACCACGGTCAATGACCTTGAATGGGAAGT 606230
Query 518463 ATTTCATATCTGATTGAACACTTTG-GTCATTAAAATCTCTACCAATTAATCGTTTTGCA 518521
|||||||| | |||||| || | || || | | |||||| || || || |||
Sbjct 606231 GCTTCATATCGGCTTGAAC-CTCAGCATCTGCGAACTTGCGACCAATCAAACGCTTAGCA 606289
Query 518522 TCAAAAATAGTATTGGTTGGATTAATTGCAGCTTGATATTTGGCTGCATCTCCAATCAGA 518581
|| || | || ||| |||| || || || |||||| ||||| |||||||| ||||||
Sbjct 606290 TCGAAGACGGTGTTGATTGGGTTCATGGCGACTTGATTCTTGGCGGCATCTCCGATCAGA 606349
Query 518582 TGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTACCTTGATCATTCGCA 518641
| || || ||||| || | ||| | ||||| || || || || ||||| || || ||
Sbjct 606350 CGCTCGGTATCTGTGAAAGCAACGAAGGATGGGGTGGTACGGTTTCCTTGGTCGTTGGCG 606409
Query 518642 ATAATTTCAACTTTACCATTTTGCCATACACCTACACAACTAAAAGTTGTTCCTAAATCA 518701
|||||||| | | || ||| | | | ||| |||||| | || || || |||||
Sbjct 606410 ATAATTTCGATTCTATCATCACGGAAGATACCCACACAAGAGTAGGTGGTACCCAAATCG 606469
Query 518702 ATACCAATA 518710
|||||||||
Sbjct 606470 ATACCAATA 606478
Score = 118 bits (130), Expect = 8e-21
Identities = 258/384 (67%), Gaps = 3/384 (1%)
Strand=Plus/Plus
Query 517258 GGCAGTCACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGAC 517317
||||| || || | || || |||||||| | ||| |||||||| ||||||||||| ||
Sbjct 604675 GGCAGAGACGTTCATGATTCCGTTGGCATCAAGATCGAATGTGACCTCAATTTGAGGAAC 604734
Query 517318 CCCTCTCTGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTT 517377
|| | | ||||||||||| || | | ||| | |||| | || || || ||
Sbjct 604735 ACCACGTGGTGCAGGTGGGATACCAGTAAGCTCGAATTTGCCCAAAAGGTTGTTGTCCTT 604794
Query 517378 AGTGAATTTTCGTTCACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATA 517437
||| || || ||||||||||| | |||||| || | | ||| || ||||| |
Sbjct 604795 GGTGCGTTGACGCTCACCCTCGAAGACTTGGATGAGGACACCTGGTTGGTTGTCTGAGAA 604854
Query 517438 AGTTGTAAATACTCTGGATTTTTTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGT 517497
|| | || || || || || || || || |||||||| ||| | |||||
Sbjct 604855 GGTGGAGAAGACCTCAGACTTCTTGGTTGGGATGGTAGTGTTTCTTGGAATGAGCTTGGT 604914
Query 517498 CATAATACCACCTGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAAT 517557
||| ||||| || || || | ||||||||| | || | |||||| | |||| ||
Sbjct 604915 CATTTGTCCACCAGCAGTCTCGATACCAAGAGACAATGGGGCGACATCGAGAAGGAGGAT 604974
Query 517558 AT--TTTGAAGTTTTTCA-TCAGTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCACC 517614
| || | || || | ||| | |||| ||||| || || || | ||||||||
Sbjct 604975 CTCGTTGGTAGACTTGGAGGAAGTGTCACCAGAGAGAATGGCAGCCTGGACGGCAGCACC 605034
Query 517615 ATATGCAACAGCTTCATCAGGATT 517638
||||||||||| |||||||| ||
Sbjct 605035 GTATGCAACAGCCTCATCAGGGTT 605058
>seq2
Length=2834403
Score = 123 bits (136), Expect = 2e-22
Identities = 171/236 (72%), Gaps = 5/236 (2%)
Strand=Plus/Minus
Query 668849 TTAAGAGGTAAAGAAGGTCGTATTAGAGGAAATTTGATGGGAAAACGTGTCGATATGTCT 668908
||||| ||||| || |||||| || | ||||||||||||||||| |||||||| | |||
Sbjct 1417717 TTAAG-GGTAAGGAGGGTCGTCTTCGTGGAAATTTGATGGGAAAGCGTGTCGACTTTTCT 1417659
Query 668909 GCACGTACAGTTATTACTTCTGATCCCAATATTGCTCTCAATGAAGTTGGTGTTCCTCTT 668968
|| ||||| ||||||||| |||||||||| || | || |||| |||||||| ||||
Sbjct 1417658 GCTCGTACTGTTATTACTGGTGATCCCAATCTTTCCCTGGATGAGGTTGGTGTCCCTCGA 1417599
Query 668969 ATTATTGCTAAAAATCTTACTTTTGACGAAATTGTAACAGAACATAATATTGAGTATTTG 669028
| |||||| | || || || | | || | ||| ||| || || || || | |||
Sbjct 1417598 AGTATTGCGAGAATCCTCACATATCCAGAGACTGTTACACCACTCAACATCGATAAATTG 1417539
Query 669029 ACTCAATTAGTGAAAAATGG--TAAAAGAGTATATCCGGGTGCCAATTTTGTAATC 669082
||| | || || ||||| | | ||| |||| |||||||| | ||| |||
Sbjct 1417538 CATCAGCTCGTTAAGAATGGCCCAGATGAG--CATCCTGGTGCCAAATATGTCATC 1417485
Score = 86.0 bits (94), Expect = 5e-11
Identities = 112/154 (73%), Gaps = 1/154 (1%)
Strand=Plus/Minus
Query 671641 TGAG-GGTCTTGGACCTTTTGAATTTTTCTTCCAAGTAATGGCAGGTCGTGAAGGTATTA 671699
|||| ||||| |||| || || |||||||| | |||||| |||||||||||| | |
Sbjct 1416283 TGAGAGGTCTCACACCTACAGAGTTCTTCTTCCACGCAATGGCTGGTCGTGAAGGTTTGA 1416224
Query 671700 TTAATACGGCTATTAAAACTGCTGATACTGGTTATATTCAAAGAAAACTTGTTAAAATGC 671759
| |||| || | || ||||| || ||||||||||||||| | ||||| ||| |
Sbjct 1416223 TCGATACCGCAGTCAAGACTGCAGAAACTGGTTATATTCAACGTCGTCTTGTCAAAGCTC 1416164
Query 671760 TCGAAGATATCAAACAAGAATATGATGGTACAGT 671793
|||| ||| | | | ||||||| ||||| ||
Sbjct 1416163 TCGAGGATGTTATGGCAAAATATGACGGTACTGT 1416130
>seq60
Length=53878
Score = 107 bits (118), Expect = 1e-17
Identities = 107/139 (77%), Gaps = 0/139 (0%)
Strand=Plus/Plus
Query 518168 TTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTA 518227
|| || | ||| || || | ||||||||||||||| ||||| | || ||| | || ||
Sbjct 27801 TTCTCCAAACCGTAAGCGAGAGCAGCAGCAGTTGGCTCATTGACAACTCTGAGGACGTTC 27860
Query 518228 AGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCA 518287
| ||| |||||| || ||||| ||||| ||||| | ||| |||||||| || |||||
Sbjct 27861 AAACCGGCAATTTGACCAGCATCCTTAGTAGCTTGACGTTGGGAATCGTTGAAGTATGCG 27920
Query 518288 GGAACAGTAATAACGGCAT 518306
|||||||||| |||||||
Sbjct 27921 GGAACAGTAACGACGGCAT 27939
>seq1
Length=6243313
Score = 98.7 bits (108), Expect = 8e-15
Identities = 104/137 (76%), Gaps = 0/137 (0%)
Strand=Plus/Minus
Query 366982 AAAATAAAAATTGTAGTAGCCACAATAGCATTTGGTATGGGTATTAATAAACCGGATGTT 367041
|| |||||| | ||||| || || ||||||||||||||||| ||| | || | | | ||
Sbjct 4573959 AACATAAAAGTCGTAGTCGCAACGATAGCATTTGGTATGGGAATTGACAAGCAGAACGTG 4573900
Query 367042 AGAGTTGTTATTCATTATGGAGCTCCCAAGAATATTGAAGGTTATTATCAAGAAATTGGT 367101
|| |||| ||||||||| | |||||| | | | ||||| ||||| || |||| |||
Sbjct 4573899 CGATTTGTCATTCATTATTGCCTTCCCAAAACTTTAGAAGGCTATTACCAGGAAACTGGG 4573840
Query 367102 AGAGCAGGTCGTGATGG 367118
|||| ||||| |||||
Sbjct 4573839 CGAGCTGGTCGAGATGG 4573823
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 3780797340236530
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |