Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monilinia_20aucupariae_20[genbank_20GCA_5F002162555.1_202017-05-31] 505 sequences; 54,948,206 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq27 251 9e-62 seq2 145 1e-29 seq26 143 3e-29 seq60 123 3e-23 seq8 122 1e-22 seq28 109 7e-19 >seq27 Length=788475 Score = 251 bits (278), Expect = 9e-62 Identities = 471/689 (68%), Gaps = 6/689 (1%) Strand=Plus/Plus Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516 ||||| ||||||||||||||||| || || || ||||| | ||||| || |||||||| Sbjct 605795 TCGAAGTCTTCACCACCCAAGTGAGTGTCACCGGCGGTGGACTTGACCTCGAAGATACCC 605854 Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576 | || ||| | || | || ||||| || || || ||||| || || || ||||| ||| Sbjct 605855 TCCTCGATGGTCAAGAGAGAGACATCGAAAGTTCCTCCACCAAGATCGAAGATGAGAACG 605914 Query 7577 TTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCA 7636 || || | || | ||||| || | |||||| || || || || || || || || Sbjct 605915 TTACGCTCACCCTCAATCTTCTTGTCCAAACCGTAAGCAATGGCAGCTGCGGTAGGCTCG 605974 Query 7637 TTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGT 7696 || || ||||| ||| ||| || |||||||| | || || || || ||||| ||| Sbjct 605975 TTGATGATACGGAGAACGTTAAGACCAGCAATGAGACCAGCGTCCTTAGTGGCTTGACGT 606034 Query 7697 TGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGA 7756 || |||||| | ||||| || ||||| || ||||| |||| | || | |||||| Sbjct 606035 TGTGAATCGGTGAAGTAAGCTGGGACTGTGACGACAGCGTTGTTAACAGTTCCACCGAGG 606094 Query 7757 TACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCA 7816 || | || || | ||| |||| ||| | | ||| || || || ||||| | | Sbjct 606095 TAAGCCTCAGCAGTCTCTCTCATCTTGACCAAGATCATGGAAGAGATTTCTTCTGGTGTG 606154 Query 7817 AACTGTTTCGTTTCACCGTTAAAATCAACTTCAATCATGGGTTTATCCGCAGCACCGGGG 7876 || || || | || || || || || || || || | || || || || ||| | Sbjct 606155 AATTGCTTGTTCTCGCCCTTGAACTCGACCTCGATGACTGGCTT-TC--CACCACGGTCA 606211 Query 7877 ATAACCTTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTTTCTT 7936 || ||||| | | | | ||||||||| |||| |||| || | ||||| | Sbjct 606212 ATGACCTTGAATGGGAAGTGCTTCATATCGGCTTGAACCTCAGCATCTGCGAACTTGCGA 606271 Query 7937 CCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTC 7996 || || | |||||| ||||| || || ||||| | ||||||||||| ||| ||||| Sbjct 606272 CCAATCAAACGCTTAGCATCGAAGACGGTGTTGATTGGGTTCATGGCGACTTGATTCTTG 606331 Query 7997 GCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTCGTT 8056 || || || ||||| ||||| || || || || || || ||| | |||||||| || Sbjct 606332 GCGGCATCTCCGATCAGACGCTCGGTA---TCTGTGAAAGCAACGAAGGATGGGGTGGTA 606388 Query 8057 CGATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGACGCAC 8116 || || ||||||||||| || |||||||| | | || | | ||| || || || Sbjct 606389 CGGTTTCCTTGGTCGTTGGCGATAATTTCGATTCTATCATCACGGAAGATACCCACACAA 606448 Query 8117 GAATACGTTGTTCCTAAATCAATACCGAT 8145 || || || || || ||||| ||||| || Sbjct 606449 GAGTAGGTGGTACCCAAATCGATACCAAT 606477 >seq2 Length=2834403 Score = 145 bits (160), Expect = 1e-29 Identities = 478/737 (65%), Gaps = 21/737 (3%) Strand=Plus/Plus Query 7028 GCTTGGACCGTCGCCCCGTATGCGACCGCCTCATCGGGGTTAATCGTTTTATTCAG-TTC 7086 ||||| || | || |||||||| || |||||||| ||||| || | || | || ||| Sbjct 2395545 GCTTGAACGGCGGCACCGTATGCAACAGCCTCATCAGGGTTGATGCTCTTCTCCAACTTC 2395604 Query 7087 TTTACCGTTAAAATAATCCGATAACATTTGTTGAATTTTCGGGATTCGTGTCGATCCACC 7146 ||| || | ||| | || || | | ||||||| | ||||| || || || ||||| Sbjct 2395605 TTT-CCATCAAAGAACTCACTCAAGAGCTTTTGAATTCTTGGGATACGGGTAGAACCACC 2395663 Query 7147 GACCAAAACGATTTCATTCACTTTCGATTTATCGATCTTTGAGTCTCGAAGTGTTTTTTC 7206 ||| | || || || | || || | ||||| || || | || || | | Sbjct 2395664 GACAAGGACAATCTCGTCAACCTTGGTCTTATCAATGTTGGCATCCTTGAGAACCTGAGC 2395723 Query 7207 GACAGGTTCCATACATTTACGGAACAAGTCCATACAC---AGTTCCTCAAAACGTGCACG 7263 ||||| |||| | ||| | || || | | || || || || | ||||| Sbjct 2395724 AACAGGCTCCAAAG---TACCGTTGAAAGCCTTTGAGTTAAGGTCTTCGAATCTGGCACG 2395780 Query 7264 GGTAATGGATGTATAGAAATCAACGCCGTCGTATAACGAATCAATTTCAATGGTTGTTTG 7323 ||| || | || |||||| | || ||| | || || ||||| || | || || Sbjct 2395781 GGTGATTTGAGCATTGAAATCCTCACCATCGAACAAGGAGTCAATCTCGACAGTGGTGGA 2395840 Query 7324 TGC--CGTCGAAGATAACGTTCGCTTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGG 7381 || ||| | ||| |||| ||| || || || || || |||| | |||||| || Sbjct 2395841 GGCACCGTTGGAGAGG--GTTCTCTTAGCACGTTCGCAAGCGGTTCTGAGACGACGGAGA 2395898 Query 7382 GCACGCGGGTTACCGGAAATATCTTTCTTATGTTTACGTTTAAACTCTTCAGAGAAGTGT 7441 ||||| |||| ||| | || ||||| || | | ||||| | |||||| Sbjct 2395899 GCACGGGGGTCGTTGGACAAGTCCTTCTTGGTCTTTCTGGTGAACTCCTTCTTGAAGTGG 2395958 Query 7442 CGAAGGAGTCTCGAATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTG 7501 |||||| | | ||||||||||| ||| ||||| || || || || || || || ||| Sbjct 2395959 TCAAGGAGGTTGGTATCGAAATCTTGACCTCCCAAATGGGTGTCACCGGCAGTAGCCTTG 2396018 Query 7502 ACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGG 7561 || |||| ||| |||| ||||| | | |||||||| || || |||||||| || Sbjct 2396019 ACGGTGAAGACACCACCTTGGATGTTGAGGAGAGAAACATCGAAAGTTCCACCACCGAGA 2396078 Query 7562 TCAAAAATGAGTACGTTCGTATCGTCGTCTTTGTTCTT------ATCGAGACCGTACGCG 7615 || | ||||| || || || | | ||| ||| | | |||||||| || Sbjct 2396079 TCGTAGATGAGAACATTGCGCTCCTTG---TTGGACTTTCCAGCACCAAGACCGTAAGCA 2396135 Query 7616 ATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCC 7675 || || || || || || || || || ||||| || ||| || || ||||| | | Sbjct 2396136 ATGGCAGCAGCGGTAGGCTCGTTGATGATACGGAGGACGTTAAGACCGGCAATGGCACCA 2396195 Query 7676 GCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCG 7735 ||||| || || ||||| ||||| ||||| |||||||| ||||| || | ||| || Sbjct 2396196 GCATCCTTGGTAGCTTGACGTTGGTTGTCGTTGAAGTAGGCTGGGACAGTGATGACTGCC 2396255 Query 7736 TCCGTGACTTTCTTACC 7752 | | ||| ||||| || Sbjct 2396256 TTTGAGACCTTCTTGCC 2396272 >seq26 Length=817252 Score = 143 bits (158), Expect = 3e-29 Identities = 252/362 (70%), Gaps = 15/362 (4%) Strand=Plus/Minus Query 7456 ATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACC 7515 ||||||||| || || |||||||| ||||| || || || | || || |||| ||| Sbjct 478970 ATCGAAATCCTCTCCTCCCAAGTGAGTATCACCGGCAGTAGAAAGAACCTCGAAGACACC 478911 Query 7516 TCCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAG---GTCAAAAATGAG 7572 | |||||| | | ||||||||||| || || ||||| || || | ||||| Sbjct 478910 ACGGTCAATGGAGAGAAGAGAAACATCAAAGGTTCCTCCACCAAGATCGTAGACAATGAT 478851 Query 7573 T--ACGTTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTT 7630 | |||||| | | || |||| || | |||||| || ||||| || || || Sbjct 478850 TTGACGTTC--ACCCTC------AGTCTTGTCCAAACCGTAGGCAATAGCTGCGGCGGTA 478799 Query 7631 GGTTCATTAATAATAC-GAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGC 7689 ||||| || | |||| || |||| |||| |||||||| | | ||||| || || || Sbjct 478798 GGTTCGTTGACGATACGGAGGACA-TTCAAACCAGCAATGATACCAGCATCCTTGGTGGC 478740 Query 7690 TTGTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTT 7749 ||||| ||| ||||| |||||||| ||||| || || || |||| || || |||| Sbjct 478739 TTGTCTTTGGTTGTCGTTGAAGTAGGCTGGGACAGTGACAACTGCGTGGGTAACAGTCTT 478680 Query 7750 ACCGAGATACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTC 7809 |||||||| ||||| |||| || ||||| || |||| ||| | |||| ||| || Sbjct 478679 TCCGAGATATGATTCGGCGACTTCCTTCATCTTTCCGAGAATCATGGCGGAAACCTCCTC 478620 Query 7810 AG 7811 || Sbjct 478619 AG 478618 >seq60 Length=53878 Score = 123 bits (136), Expect = 3e-23 Identities = 228/330 (69%), Gaps = 12/330 (4%) Strand=Plus/Plus Query 7456 ATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACC 7515 ||||||||||||||| |||||||| ||||| || ||| | ||||||||| |||| ||| Sbjct 27665 ATCGAAATCTTCACCTCCCAAGTGAGTATCACCGTTGGTAGATTTGACTTCGAAGACACC 27724 Query 7516 TCCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTAC 7575 || || | | | |||| ||| || ||||| || |||| || ||| | | Sbjct 27725 CTTTTGGATCTCGAGAACGGAAATATCGAAGGTACCTCCGCCCAAATCGTAAACGGCGAT 27784 Query 7576 GTTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTC 7635 | || | || || || ||| || | |||||| |||| ||| || || ||||| || Sbjct 27785 GATCTTGTCCTCATC------CTTCTCCAAACCGTAAGCGAGAGCAGCAGCAGTTGGCTC 27838 Query 7636 ATTAATAA-TACGAAGACAGTTCAGGCCAGCAATAGTTG--CCGCATCTTTCGTCGCTTG 7692 ||| | || | || ||| ||||| || ||||| ||| | ||||| || || ||||| Sbjct 27839 ATTGACAACTCTGAGGAC-GTTCAAACCGGCAAT--TTGACCAGCATCCTTAGTAGCTTG 27895 Query 7693 TCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACC 7752 ||||| |||||||| ||||| || || || || ||||| || | | || ||| Sbjct 27896 ACGTTGGGAATCGTTGAAGTATGCGGGAACAGTAACGACGGCATTCTGAACAGGCTTGGT 27955 Query 7753 GAGATACGATTCCGCGATATCTTTCATTTT 7782 ||| || | ||| || | || |||||||| Sbjct 27956 GAGGTAAGCTTCGGCAGTCTCCTTCATTTT 27985 >seq8 Length=1964072 Score = 122 bits (134), Expect = 1e-22 Identities = 510/799 (64%), Gaps = 21/799 (3%) Strand=Plus/Minus Query 105284 ACTCCAGAATTTCTGTACACAAATTTGATGATTTAATCGTACCAACGTGTTTATGGTTCG 105343 |||| | ||| ||||| || || || || ||| ||||||| || || ||||| Sbjct 141112 ACTCGACAATCTCTGTGCATAAGTTGGAGCTGCGAATAGTACCAAGGTTCTTTTGGTTAC 141053 Query 105344 ACTTTTCATTACACGCGTCTTTGTAAAGCATATATGGGGTTCCCGTTTCACTTTGGGATT 105403 ||| | || || || |||||||||||||| | || ||||||| || |||||| | Sbjct 141052 TCTTCTTGTTGCATGCATCTTTGTAAAGCATGAAAGGATTTCCCGTCTCGGTTTGGGCCT 140993 Query 105404 TAATAATTGCTTTCCAAATCTCCGAAGC--TGGTACAACTTTAG----TTGCGATACCTT 105457 | ||| | | ||||| || ||| || || ||| | |||| | |||| Sbjct 140992 CGAGAATAGAGTACCAAAGCTTTTGAGCCTTGATAGT-CTTGCGACCCTTGCCAG-CCTT 140935 Query 105458 CAGATTCGTATTTCTCGTAAAGATCTTCAAACTCTTTACCGTACACGTCTGAAAGACCCT 105517 | ||||| |||| || ||| | || ||||||| || || || |||| | |||| Sbjct 140934 C----TCGTAACTCTCATAGAGAGCCTCGAACTCTTCGCCATAAACATCTGCCAAACCCG 140879 Query 105518 TTGCCTGATCAGGACAAAACAATGACCAATTACCATCGGATTCAACGCGTTTCATGAACA 105577 | | || || | | | ||| | |||| |||||| || ||||| || | Sbjct 140878 GACATTCGTTGGGGCACATAAGAGTCCACTCTCCATTCTTTTCAACACGCTTCATAAATA 140819 Query 105578 AATCTGGAATCCACATGGCTGAAAAGAGGTCTCGACACCTCGCCTCTTCATCACCTTGAT 105637 ||| |||||||||| ||| | ||||| || || | | ||||| | || |||| Sbjct 140818 GATCAGGAATCCACAAGGCGTAGAAGAGATCACGTGCACGAACTTCTTCCTTGCCATGAT 140759 Query 105638 TCAAACGAATTTCGAGAAAATCGAGAATATCGGCGTGCCATGGTTC----TAAATA--GA 105691 || || | || ||||| |||| || || || ||||||||||| |||||| || Sbjct 140758 TCTTGCGCAGATCAAGAAACTCGAAAACGTCAGCATGCCATGGTTCAAGGTAAATAGCGA 140699 Query 105692 CTGCAATAGACCCTTTACGACGCCCCGCTTGATTGACATATCTTGCGGTTGAGTTATACA 105751 ||| || | ||| | || |||||| |||||||| ||||| ||| | | Sbjct 140698 AAGCACCAGGTCGCTTATTA---CCACCTTGATCAACATATCTGGCGGTGTTGTTGAAAA 140642 Query 105752 CTCGTAACATTGGAATAATACCATCGGATGTTCCATTTGTTCCACGAATATGTGATTTAT 105811 |||| | ||| || | ||| || | ||| |||| || || || || | || | Sbjct 140641 CTCGGAGCATAGGGACAATGCCGTTGGAGTTTCCGTTGGTGCCGGCGATGTATGCACCAG 140582 Query 105812 TTGCACGTACATCGTGAACGTGTAACCCAATACCCCCAGCCCACTTACTGATACGCGCAC 105871 | ||||| | |||||||| | |||||||| || || ||| || |||| Sbjct 140581 TAGCACGGATTCTGTGAACGTTGAGACCAATACCACCGGCATTCTTCGAAATCATGGCAC 140522 Query 105872 ACTCTTTTACTGTATCGTAAATACCGTCGATACTATCTTCCTTATTCGCAATCAGGAAAC 105931 | || | || ||||||||||| || ||||| || ||||| | | || ||||| | Sbjct 140521 AAATCTTCAAAGTGTCGTAAATACCATCAATACTGTCCTCCTTCATGTCGATGAGGAAGC 140462 Query 105932 ACGATGACATTTGTGGTCTGGGTGTACCAGCATTGAACAGAGTTGGTGTTGCATGAATGA 105991 | ||||| | ||||| | || || || ||| ||| || || || | ||||| ||| Sbjct 140461 ATGATGAAAGTTGTGCTTGTGGAGTTCCCGCAGAGAAGAGTGTCGGGGAGGCATGGGTGA 140402 Query 105992 ACAAACCTTTCGATAACGCTTCGTATGTTTCCAGGACGTGATCAATATCGTGTCCATGAA 106051 | | || || | | | |||||| || | | |||||||| | ||||||| Sbjct 140401 AGTACTTGTTTGACATCAAGTTGTATGTCTCGATAGCACTCTCAATATCATCACCATGAA 140342 Query 106052 TACCAATAGCGACGCGCAT 106070 |||||| || || ||||| Sbjct 140341 TACCAACGGCAACACGCAT 140323 >seq28 Length=721443 Score = 109 bits (120), Expect = 7e-19 Identities = 259/386 (67%), Gaps = 19/386 (5%) Strand=Plus/Minus Query 11310 GTCGAGTATATCGATACGGTTTGTTGCACCTATAACAACAATTT---CAGTTTCATTCTC 11366 ||| |||| |||| | ||| || || | | |||||||||| ||||| ||| Sbjct 551230 GTCAAGTACATCGGGTCTGTTAGTACCAGCGAGCACAACAATTTGCTCAGTTGTATT--- 551174 Query 11367 GAAACCATCCATTTCTGTTAATAATTGGTTAATTGTTTGTTCACGCTCATCGTTTGC--- 11423 |||||||||||| || || || | ||| || | ||| ||| || ||||||||| | Sbjct 551173 GAAACCATCCATCTCGGTCAAAATTTGATTGAGTGTAGCTTCGCGTTCATCGTTTCCACC 551114 Query 11424 ---CGCAAACCCATTCATACTT----CTTTTCTTACCAATCGCATCAATTTCATCTATAA 11476 || ||| ||| || |||| | ||| ||||| ||||| || ||||| || | Sbjct 551113 TCCCGAAAATCCAC-CAGACTTGCCACGAGACTTCCCAATAGCATCGATCTCATCAATGA 551055 Query 11477 AGATAATACACGGTTGATTTTCACGTGCCAATTCAAATATATCACGGACTCTTTTTGCGC 11536 | ||||||||||| | | | | ||||| |||| | ||| || ||||| ||| | Sbjct 551054 ATATAATACACGGAGTACTCTTTCTTGCCATGGCAAAAAGATCTCGAACTCTCGATGCTC 550995 Query 11537 CTACGCCTACAAACATTTCAACGAACGATG-ACCCCGAACACTGAATAAAAGGAACGGAA 11595 | || || || ||||| || || ||| | ||| | ||||| || || || || | Sbjct 550994 CAACACCCACGAACATCTCCACAAACTCGGAACCACTGACACT-AAAGAATGGTACTTGA 550936 Query 11596 GATTCACCCGCTATAGCACGTGCTAAAAGTGTTTTACCTGTACCTGGTTTACCTGTTAAT 11655 ||||| || ||| | || ||||| || |||||||| ||||||||| || | || Sbjct 550935 GATTCGCCAGCTGTTGCCTTTGCTAGTAGAGTTTTACCAGTACCTGGTGGTCCAGATAGA 550876 Query 11656 AATGCACCCCTTGGTATTTTAGCACC 11681 | || || | || ||||||||||| Sbjct 550875 ATAGCGCCTCGAGGAATTTTAGCACC 550850 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635128790724200