Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monilinia_20aucupariae_20[genbank_20GCA_5F002162555.1_202017-05-31] 505 sequences; 54,948,206 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq8 228 1e-54 seq3 84.2 3e-11 >seq8 Length=1964072 Score = 228 bits (252), Expect = 1e-54 Identities = 1161/1815 (64%), Gaps = 63/1815 (3%) Strand=Plus/Minus Query 105595 ATAGTACATCCCGGTCTTGAGTCCTTGTTTCCACGCGTACATATGCATAGAAGAGAGCTT 105654 ||||||||| |||||||| | || ||||||| | | |||||||| | | ||| Sbjct 142026 ATAGTACATTCCGGTCTTCAAACCCAGTTTCCAACCAGCAAAGTGCATAGATGTAATCTT 141967 Query 105655 GGACATCGTTGGACTTTCCATGAAAAGATTCATACTTTGACTCTGGTCAATGAAGCGACC 105714 | ||| || ||| | |||| || ||||| ||| || || |||||| ||| Sbjct 141966 GCCCATTGTAGGATCCTTCATGTGAATGTTCATCGATTGGGATTGATCGATGAAGGCACC 141907 Query 105715 ACGTTGTGCCGCCATATCAATGACATCCTTCATCTTGA--TTTCCCACACTGTGCGGTAG 105772 ||| | || ||||| | || || | ||| || ||||||| || || ||| Sbjct 141906 ACGATCGGCAGCCATCTGAACGA--TTGTTCGCTGAGAAATTTCCCAAACAGTCTTGTAA 141849 Query 105773 AGATTCTTGATATCATCTGGGATATCTGAGATATTTTGAATTGAACCCCCCGCCTTGACC 105832 || |||||||||| ||||||||| | || ||||| || || || || | || Sbjct 141848 AGGGCCTTGATATCAGCTGGGATATTAGGAATGTTTTGGATGGATCCGCCATCAGCGATG 141789 Query 105833 ATGAGATCCTTCATATCCTTGGACCAAAGACCAATCTTCTTGAGATCATTGACGAGATGC 105892 || | | |||||| | | ||||||||||| || | ||| || |||| || | Sbjct 141788 ATACGGTTCTTCATGTTGTCCGACCAAAGACCCATATCGACGAGGTCCTTGAGAAGC--C 141731 Query 105893 TTG--TTGACAATCACAAACTCTCCCGCGAGGGTTCTTCTCAGA-TAGATGTTCGTCGTG 105949 || ||||| | || ||||| || || | | ||| || ||||| | ||| Sbjct 141730 ATGGATTGACGACTTGGAATTCTCCAGCAAGAACACGACG-AGAGTAAATGTTTGAAGTG 141672 Query 105950 TAGGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATTGGT 106009 || ||||| || |||||||| ||| | ||||| | ||| || |||||||| ||| Sbjct 141671 TAAGGTTCGAAACATTCATTGAAACCAAGAATTTGGGATGTGCTAGCAGTTGGCATGGGT 141612 Query 106010 GCCATCAAAAGACTGTTACGAAGACCCTTTTCCTTGATGCGTTCCTTGAGAACATCCCAG 106069 || | | ||| ||| |||| || | || ||||||| || ||| | | ||||| Sbjct 141611 GCAACGAGGAGAGAGTTGCGAACTCCGTGTTGCTTGATGGATTGCTTCAAAGAGTCCCAA 141552 Query 106070 TCGTAGT--TGAGCTTGGTTTCACCTTCCCACATATCAAATTGAAGCAC-CCCTTGG-GA 106125 || | | | || ||| | || ||||||| || |||| || | ||||||| || Sbjct 141551 TCCCACAAATCA-CTAGGTGTAACAC-CCCACATGTCGTATTGGAGTTCACCCTTGGAGA 141494 Query 106126 CGTGGGAGAACCCTCAAATGTCTCATAGGAACCTTGGGCTTCAGCCAATTC-ACAGCTCG 106184 | ||||| || ||| | || ||||| | ||| | | | || | || || | | Sbjct 141493 CT--GGAGAGCCTTCATAGGTTTCATATGGACCAAGCTCCTTTGCAATCTCGACGGATGA 141436 Query 106185 CCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCATCTCCTTGGCTTCAT 106244 || ||| | || || || ||||| || || || | || | | ||| ||||| Sbjct 141435 GGTCAAGGCA-GCATGGTAGATGGTCTCGAAAATTTGGATGTTGAGGTGCTTAGCTTCTG 141377 Query 106245 CTGAATCAAATGCGTAGCGGCACAA--AATAAATACATCCGCGAGACCTTGAACACCCAA 106302 || || |||| | || | | | || ||| |||| || ||||| |||||||| | Sbjct 141376 GAGAGTCGAATG-GAAGTCGGAGAGCCAAGAAAG-CATCAGCAAGACCCTGAACACCGAC 141319 Query 106303 ACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCAACGGGATAAAAATTTCT 106362 | | ||||||| ||| || | ||| ||| || | ||| || ||| | || | Sbjct 141318 AGCGATAGGTCGGTGACGGAAATTGCTCTTCTTGGCTTCTTGAACTGGGTAATAGTTGAT 141259 Query 106363 GTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCATGAAGTTTTTCATA 106422 || |||| ||| | |||| | ||||| || |||| || ||||| || | | Sbjct 141258 GTTGATGATCTTGTTCAAATTTCTAACAACAACCTGAGTGACCTCGTGAAGCTTGTGGAA 141199 Query 106423 ATCAAAAGTGCGAGTCTC-TTCAT--TGACATACTTTGGAAGGGCGATTGATGCCAAATT 106479 |||| |||| | ||| ||||| ||||| | |||| | ||||| || ||||| || Sbjct 141198 ATCATAAGTTCC---CTCATTCATGTTGACAAAAGTTGGCAAAGCGATAGAAGCCAAGTT 141142 Query 106480 GCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACACAAGTTGGAACT 106539 ||| ||| |||||| | | |||||| | ||| ||||| || |||||||| || Sbjct 141141 ACAACAAGCAACCTCATCTGGCGCAGAGTACTCGACAATCTCTGTGCATAAGTTGGAGCT 141082 Query 106540 CTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTGTTGCACGCATCCTTGTAGAGCAT 106599 ||| || || | ||||||||||||||||| |||||||| ||||| ||||| ||||| Sbjct 141081 GCGAATAGTACCAAGGTTCTTTTGGTTACTCTTCTTGTTGCATGCATCTTTGTAAAGCAT 141022 Query 106600 GTAGGGCGTCCCCGTCTCCGTCTGTGACTTGAGAATTGCCTTCCACA-CATCGGCGGC-T 106657 | | || | |||||||| || || | || |||||| | | ||| | | | | | | | Sbjct 141021 GAAAGGATTTCCCGTCTCGGTTTGGGCCTCGAGAATAGAGTACCAAAGCTTTTGAGCCTT 140962 Query 106658 GGTACAATGGCGTTGGCCCGT-CCCTCCGCCTCGTACTTTGTGTAGAGGGCTTCAAACTC 106716 | || | || | ||| | || || |||||| | ||||| || || ||||| Sbjct 140961 GATAGTCTTGC---GACCCTTGCCAGCCTTCTCGTAACTCTCATAGAGAGCCTCGAACTC 140905 Query 106717 CTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAGAAAAGAGACCATTGACC 106776 || || | || | | ||| || | || || || | ||||| ||| | || Sbjct 140904 TTCGCCATAAACATCTGCCAAACCCGGACATTCGTTGGGGCACATAAGAGTCCACTCTCC 140845 Query 106777 ACCCTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAAAGAGATCTC- 106835 | || ||||| |||||||| || || || |||||||||| || | |||||||| | Sbjct 140844 ATTCTTTTCAACACGCTTCATAAATAGATCAGGAATCCACAAGGCGTAGAAGAGATCACG 140785 Query 106836 TACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCATGATATCCG 106895 | || ||| | ||||| | || || || || | ||||| ||||| | | || | Sbjct 140784 TGCA-CGAACTTCTTCCTTGCCATGATTCTTGCGCAGATCAAGAAACTCGAAAACGTCAG 140726 Query 106896 CGTGCCATGGCTCAAGATAGACTGCGATAGATCCCTTTCG---ACGCCCAGCTTGATTTA 106952 | |||||||| ||||| || | |||| || || ||| | ||| |||||| | Sbjct 140725 CATGCCATGGTTCAAGGTAAATAGCGAAAGCACCAGGTCGCTTATTACCACCTTGATCAA 140666 Query 106953 CATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCATCTGATTGACCAT 107012 |||| | || ||| ||| || || || ||||| || | ||| || | || | || | Sbjct 140665 CATATCTGGCGGTGTTGTTGAAAACTCGGAGCATAGGGACAATGCCGTTGGAGTTTCCGT 140606 Query 107013 TTGTCCCCCGAATACGAGATTTATTGGCTCTCACATCATGGAT---------GTGCATCC 107063 | || || | ||| ||| || | | || |||| || | | Sbjct 140605 TGGTGCC-------GGCGATGTAT--GCACCAGTAGCACGGATTCTGTGAACGTTGAGAC 140555 Query 107064 CAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGT 107123 ||||||| || || ||| || || ||||| | | | ||| | || ||||| | Sbjct 140554 CAATACCACCGGCATTCTTCGAAATCATGGCACAAATCTTCAAAGTGTCGTAAATACCAT 140495 Query 107124 TGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGTGTAC 107183 || ||||||||| || |||| |||||||| || | || | | ||| || | Sbjct 140494 CAATACTGTCCTCCTTCATGTCGATGAGGAAGCATGATGAAAGTTGTGCTTGTGGAGTTC 140435 Query 107184 CAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCT-TGGGACATCTTGTCGTAT 107242 | ||| |||||| || || | || || |||| ||| | | |||||| || |||| Sbjct 140434 CCGCAGAGAAGAGTGTCGGGGAGGCATGGGTGAA-GTACTTGTTTGACATCAAGTTGTAT 140376 Query 107243 GTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATGGCCACACGCATAAACATG 107302 ||||| | || ||||| || || || || || || | ||| |||||||| | ||| Sbjct 140375 GTCTCGATAGCACTCTCAATATCATCACCATGAATACCAACGGCAACACGCATGATCATT 140316 Query 107303 TATTGGGGTGTTTCCATGAGGATGCCATCGAGCCGTTGAAGATA-GCTCTTCTCAAGGGT 107361 | ||| || ||| | |||||||||| ||| |||| || | || |||| || || Sbjct 140315 TGTTGTGGACGTTCTGCAACTTTGCCATCGAGGCGTAGAAGGTATGATC-TCTCGAGAGT 140257 Query 107362 TTTGAGACCAAAGTA 107376 |||| || ||||| Sbjct 140256 CTTGAACCCGAAGTA 140242 >seq3 Length=2715537 Score = 84.2 bits (92), Expect = 3e-11 Identities = 147/213 (69%), Gaps = 6/213 (3%) Strand=Plus/Plus Query 117285 GTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCTGGCATGAGACC 117344 ||||||||| || || ||||| || ||||| || ||||| || || | ||||||||| Sbjct 2405681 GTGGAGACCTTCGTCACGGGAGATGAGTTCGTTGGAGAAAGTAAGTCCGGCCATGAGACC 2405740 Query 117345 CCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTCCACACA 117404 |||||||| | ||| | |||| ||| || ||||||||||| ||||| || || Sbjct 2405741 ACGCTTCTTGAGCCAGAAGATAGATGCGAAGGATCCGGAGAAGAAAATACCTTCAACGGC 2405800 Query 117405 CGCAAACGCAAAAAGGCGCTCGGCGAAGGAGCGAGACTTTGTGTC---AAACCATTTCAT 117461 || || || | || || | || |||| ||| || |||| || ||| || | Sbjct 2405801 AGCGAATGCGACGAGACGTTGAGCAAAGG---TAGAGTTCTTGTCTTGAATCCACTTGAC 2405857 Query 117462 TGCCCATTTCGCCTTCTTCTCAATACATGGTAC 117494 ||||| | |||||||| | ||| || || || Sbjct 2405858 AGCCCAGTCGGCCTTCTTTTTAATGCAAGGAAC 2405890 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589977075746200