Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monilinia_20aucupariae_20[genbank_20GCA_5F002162555.1_202017-05-31] 505 sequences; 54,948,206 total letters Query= NC_015280.1 Length=181044 Score E Sequences producing significant alignments: (Bits) Value seq3 141 1e-28 >seq3 Length=2715537 Score = 141 bits (156), Expect = 1e-28 Identities = 207/293 (71%), Gaps = 0/293 (0%) Strand=Plus/Plus Query 153747 GATATTGCTGTAGGTAGTATGCAAAGGTTTGGTATTCCTATGGGATATGGAGGTCCTCAT 153806 ||||||||| | || | | || | ||||| |||| | || ||||| ||||| ||| Sbjct 2344020 GATATTGCTTTTGGAAATGCTCAGCGTTTTGGAGTTCCATTTGGCTATGGCGGTCCACAT 2344079 Query 153807 GCTGCATTCTTTGCAACAACAGACAAGTATAAGAGAAAGATACCTGGCAGAATTGTAGGT 153866 ||||| |||||||| | || ||||||||||||||||| || || | | | ||| Sbjct 2344080 GCTGCTTTCTTTGCTGTTAGTGATAAGTATAAGAGAAAGATTCCCGGACGTCTCATCGGT 2344139 Query 153867 CAGTCAGTAGATAGTGAAGGTAATAAAGCATACAGATTAGCACTACAGACTAGAGAGCAG 153926 || ||| || ||| |||||||| ||||| ||| | || |||||||| || Sbjct 2344140 ATATCGAAAGACAGGTTAGGGGATAAAGCAATGAGATTGGCATTGCAAACTAGAGAACAA 2344199 Query 153927 CATATCAGGAGAGACAAAGCAACCAGTAACATCTGCACAGCTCAGGCACTGCTGGCTAAT 153986 || || | ||||| || || || ||||| | || || ||||| ||| || |||| || Sbjct 2344200 CACATTCGCAGAGAAAAGGCTACTAGTAATGTGTGTACGGCTCAAGCATTGTTGGCCAAC 2344259 Query 153987 ATGTCTGGATTCTATGCAGCATATCATGGTGCAGATGGACTACATGCTATAGC 154039 ||| || ||||||||||| |||||||| |||| ||||| | || ||||| Sbjct 2344260 ATGAGTGCATTCTATGCAGTTTATCATGGACCAGAAGGACTTAAGGCGATAGC 2344312 Score = 113 bits (124), Expect = 5e-20 Identities = 146/200 (73%), Gaps = 4/200 (2%) Strand=Plus/Plus Query 154928 ATGTAAGATCGTTCATGACAATGGTGGTCAGGTATATCTTGATGGAGCAAATCTAAATGC 154987 |||| | || ||||| | |||||||||| ||||| | ||||| || || | || || Sbjct 2345270 ATGTGACATTGTTCACCAGCATGGTGGTCAAGTATACATGGATGGCGCCAACATGAACGC 2345329 Query 154988 ACAGGTAGGACTAGCAAAACCATGTGAGTATGGTGCAGATGTATGTCATCTAAACTTACA 155047 || | ||| || ||| ||||| |||||| |||||||| ||||| ||| | || Sbjct 2345330 TCAAATCGGATTATGTTCACCTGGTGAGATTGGTGCCGATGTATGCCATCTTAACCTTCA 2345389 Query 155048 TAAAACATTCTGTATTCCACATGGAGGTGGAGGTCCTGGCGTAGGTCCTATAGGTGTAGC 155107 || || ||||||||||| ||||||||||| || || || || ||||| || ||||| | Sbjct 2345390 CAAGACGTTCTGTATTCCTCATGGAGGTGGTGGACCAGGTGTTGGTCCAATTGGTGT--C 2345447 Query 155108 AAA--ACATCTCACACCATT 155125 ||| ||||| ||||||| Sbjct 2345448 AAATCCCATCTGGCACCATT 2345467 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 579209143719200