Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monilinia_20aucupariae_20[genbank_20GCA_5F002162555.1_202017-05-31] 505 sequences; 54,948,206 total letters Query= NC_015284.1 Length=183806 Score E Sequences producing significant alignments: (Bits) Value seq3 136 5e-27 >seq3 Length=2715537 Score = 136 bits (150), Expect = 5e-27 Identities = 279/412 (68%), Gaps = 7/412 (2%) Strand=Plus/Plus Query 159394 TGTTTGATACCAGAGTCAGCACATGGAACTAATCCTGCATCAGCAGTGATGGCAGGGATG 159453 || ||||| || | || || ||||| || || ||||||||||| | |||||||| ||| Sbjct 2345058 TGCTTGATTCCCGTTTCTGCTCATGGTACCAACCCTGCATCAGCTGCTATGGCAGGTATG 2345117 Query 159454 AAAGTTGTAGGTGTCAAGTGTGATGATGA---TGGCAACATAGACATCAAAGATCTAGAG 159510 ||||| ||| || ||||| | | ||| || | ||||| |||||| || Sbjct 2345118 CGTGTTGTTACTGTGAAATGTGACATTAAATCTGGTAATCTCGACATGGCAGATCTTAAG 2345177 Query 159511 AAGAAAGCAATCATGAATACATTTGAACTGTCATGTATTATGATTACATATCCATCTACA 159570 || | | ||| || || | ||| ||||| ||||||||| ||| Sbjct 2345178 GCCAAGTGTGAGAAGTATAGCGAAGAGCTTGGAGCTATCATGATCACATATCCAAGTACC 2345237 Query 159571 CATGGTGTATTTGAAACAAACATCAGACAGATATGTAAGATTGTTCATGAGAATGGTGGT 159630 |||||| || || || | ||| | |||| | |||||||| || |||||||| Sbjct 2345238 TTTGGTGTGTTCGAGCCAGAAGTCAAAGCTGCATGTGACATTGTTCACCAGCATGGTGGT 2345297 Query 159631 CAGGTATATCTTGATGGTGCAAATCTAAATGCACAGGTAGGTCTAGCAAAACCATGTGAC 159690 || ||||| | ||||| || || | || || || | || || ||| |||| Sbjct 2345298 CAAGTATACATGGATGGCGCCAACATGAACGCTCAAATCGGATTATGTTCACCTGGTGAG 2345357 Query 159691 TATGGTGCAGATGTATGTCATCTAAACTTACATAAGACATTCTGTATTCCACATGGAGGT 159750 |||||| |||||||| ||||| ||| | || ||||| ||||||||||| ||||||||| Sbjct 2345358 ATTGGTGCCGATGTATGCCATCTTAACCTTCACAAGACGTTCTGTATTCCTCATGGAGGT 2345417 Query 159751 GGAGGTCCTGGCGTAGGTCCTATTGGTGTAGCAAA--ACATCTCACACCATT 159800 || || || || || ||||| |||||||| |||| ||||| ||||||| Sbjct 2345418 GGTGGACCAGGTGTTGGTCCAATTGGTGT--CAAATCCCATCTGGCACCATT 2345467 Score = 129 bits (142), Expect = 7e-25 Identities = 188/266 (71%), Gaps = 0/266 (0%) Strand=Plus/Plus Query 158449 TTTGGTATTCCTATGGGATACGGAGGTCCTCATGCTGCATTCTTTGCAACAACAGACAAG 158508 ||||| |||| | || || || ||||| |||||||| |||||||| | || ||| Sbjct 2344047 TTTGGAGTTCCATTTGGCTATGGCGGTCCACATGCTGCTTTCTTTGCTGTTAGTGATAAG 2344106 Query 158509 TATAAGAGAAAGATACCTGGCAGAATTGTAGGTCAGTCAGTAGATAGCGAAGGTAATAAA 158568 |||||||||||||| || || | | | ||| || ||| || ||| ||||| Sbjct 2344107 TATAAGAGAAAGATTCCCGGACGTCTCATCGGTATATCGAAAGACAGGTTAGGGGATAAA 2344166 Query 158569 GCATACAGATTAGCACTACAGACTAGAGAGCAGCATATCAGAAGAGACAAAGCAACCAGT 158628 ||| ||||| ||| | || |||||||| || || || | ||||| || || || ||| Sbjct 2344167 GCAATGAGATTGGCATTGCAAACTAGAGAACAACACATTCGCAGAGAAAAGGCTACTAGT 2344226 Query 158629 AACATCTGCACAGCACAAGCACTGCTGGCTAATATGTCTGGGTTCTATGCAGCATATCAT 158688 || | || || || |||||| || |||| || ||| || |||||||||| |||||| Sbjct 2344227 AATGTGTGTACGGCTCAAGCATTGTTGGCCAACATGAGTGCATTCTATGCAGTTTATCAT 2344286 Query 158689 GGTGCAGATGGACTACATGCTATAGC 158714 || |||| ||||| | || ||||| Sbjct 2344287 GGACCAGAAGGACTTAAGGCGATAGC 2344312 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588047487926800