Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monilinia_20aucupariae_20[genbank_20GCA_5F002162555.1_202017-05-31] 505 sequences; 54,948,206 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq27 147 5e-30 seq17 138 3e-27 seq1 111 3e-19 seq8 86.0 1e-11 >seq27 Length=788475 Score = 147 bits (162), Expect = 5e-30 Identities = 155/204 (76%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996 ||| || ||| ||| |||||||| |||||||||| ||| ||||| || || || | ||| Sbjct 516432 GTGCAGGGTGCTCTCCTTTTGAATGTTGTAATCGGAAAGGGTTCTGCCGTCCTCCAACTG 516373 Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056 ||| ||||| ||||| | |||||||||||| || ||||| || || ||||| || || || Sbjct 516372 CTTTCCTGCAAAGATCAATCGTTGTTGGTCAGGTGGAATACCCTCCTTGTCCTGGATCTT 516313 Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116 ||||||||| ||||| || || || ||| ||||| | |||| ||||| || || Sbjct 516312 CGACTTGACGTTATCAATAGTATCTGACGATTCTACTTCTAACGTAATTGTCTTACCAGT 516253 Query 195117 CAAAGTTTTTACGAACACTTGCAT 195140 ||| || || || || | |||||| Sbjct 516252 CAAGGTCTTGACAAAGATTTGCAT 516229 Score = 134 bits (148), Expect = 3e-26 Identities = 146/194 (75%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 194923 AGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTC 194982 ||||||| || | |||||| || ||||| || ||||||||||| |||| || || | Sbjct 515990 AGTCTCAGGACCAAGTGAAGGGTCGACTCCTTCTGAATATTGTAGTCGGAGAGGGTACGA 515931 Query 194983 CCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCT 195042 ||||| || || ||||| || ||||| || | || ||||| || || || || || || Sbjct 515930 CCATCCTCAAGTTGCTTTCCGGCGAAAATCAAACGCTGTTGATCGGGTGGGATACCCTCC 515871 Query 195043 TTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTA 195102 || ||||| || ||| |||||| || || |||||||| ||| ||| ||||||||||| Sbjct 515870 TTATCTTGGATCTTTGACTTGACATTATCGATGGTGTCAGAAGATTCGACTTCAAGGGTG 515811 Query 195103 ACCGTCTTTCCTGT 195116 | |||||||| || Sbjct 515810 ATGGTCTTTCCGGT 515797 Score = 113 bits (124), Expect = 1e-19 Identities = 143/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 194944 GTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACCT 195003 || || || ||||| || ||||| || | | || | |||||||| ||||||||||| Sbjct 516197 GTAGATTCCTTTTGGATGTTGTAGTCTGACAACGTGCGGCCATCTTCAAGCTGCTTACCA 516138 Query 195004 GCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTG 195063 || |||||||| || ||||| || || ||||| || || || |||||||| || ||| Sbjct 516137 GCAAAGATAAGACGCTGTTGATCAGGTGGAATACCCTCCTTATCTTGAATCTTAGATTTG 516078 Query 195064 ACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTT 195123 || || || || || ||||| || || || | || | |||||||| ||||| || Sbjct 516077 ACATTGTCGATCGTATCCGATGACTCAACCTCCAAAGTGATGGTCTTTCCAGTCAAGGTC 516018 Query 195124 TTTACGAACACTTGCAT 195140 || ||||| | |||||| Sbjct 516017 TTAACGAAGATTTGCAT 516001 >seq17 Length=1064257 Score = 138 bits (152), Expect = 3e-27 Identities = 162/219 (74%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 194922 GAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCT 194981 ||| | ||| || | |||||| |||||||| ||||| || ||||| |||| |||||| | Sbjct 789769 GAGACGCAACACCAAGTGAAGGGTGGACTCCTTTTGGATGTTGTAGTCGGAAAGAGTACG 789710 Query 194982 CCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTC 195041 ||||| || || ||||| || |||||||| | ||| |||||||| || || || || || Sbjct 789709 GCCATCCTCAAGTTGCTTTCCAGCGAAGATCAATCGCTGTTGGTCGGGTGGGATTCCCTC 789650 Query 195042 TTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGT 195101 ||||| || || || |||||| || || |||||||||||| || || || ||||| Sbjct 789649 CTTGTCCTGGATCTTGGACTTGACATTGTCGATGGTGTCCGAAGACTCAACCTCGAGGGT 789590 Query 195102 AACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 | || || || || | || || ||||| | ||||| Sbjct 789589 GATGGTTTTGCCCGTAAGGGTCTTGACGAAGATCTGCAT 789551 >seq1 Length=6243313 Score = 111 bits (122), Expect = 3e-19 Identities = 132/179 (74%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 194953 TTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACCTGCGAAGATA 195012 ||||| || |||||||| | ||||| | || || || || ||||| || |||||||| Sbjct 2454774 TTTTGGATGTTGTAATCTGAGAGAGTACGTCCGTCCTCAAGTTGCTTTCCAGCGAAGATC 2454715 Query 195013 AGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCA 195072 | |||||||| || |||||||| || || ||||| || || || |||||| || ||| Sbjct 2454714 AAACGTTGTTGATCGGGAGGAATTCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCA 2454655 Query 195073 ATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAA 195131 |||||||| || || || |||||||| | ||||| || || | || || ||||| Sbjct 2454654 ATGGTGTCAGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTAAGGGTCTTGACGAA 2454596 >seq8 Length=1964072 Score = 86.0 bits (94), Expect = 1e-11 Identities = 188/279 (67%), Gaps = 2/279 (1%) Strand=Plus/Plus Query 160589 TTCTACGCCATCTGGACTTCCGATCTTTTCATGAAGAGAGTGAAAGACAATGGGGATTGG 160648 ||||||||| | |||| | | ||||| || |||||| | || || | ||||| || ||| Sbjct 140794 TTCTACGCCTTGTGGATTCCTGATCTATTTATGAAGCGTGTTGAAAAGAATGGAGAGTGG 140853 Query 160649 AGCCTTTTCTGTCCCAATGAAGCGCCTGGACTTGATGATGTTTATGGTTCCGAGTTCGAG 160708 | ||| | || ||||| ||| || || | | ||||||||||| ||||||||| Sbjct 140854 ACTCTTATGTGCCCCAACGAATGTCCGGGTTTGGCAGATGTTTATGGCGAAGAGTTCGAG 140913 Query 160709 ACTCTTTATGAAAGATACGAAAAAG-AGGGAAGAGCCAAAAAGGTCGTGAAGGCCCAAGA 160767 |||| ||||| || ||||| || | || ||| | | ||| | ||||| ||| | Sbjct 140914 GCTCTCTATGAGAGTTACGAGAAGGCTGGCAAGGGTC-GCAAGACTATCAAGGCTCAAAA 140972 Query 160768 ACTGTGGCATCACATCCTTGTCGCCCAAGTCGAGGTGGGTATGCCCTTTATCGCATACAA 160827 || ||| | || || | |||||| |||| ||| | || || || ||||| Sbjct 140973 GCTTTGGTACTCTATTCTCGAGGCCCAAACCGAGACGGGAAATCCTTTCATGCTTTACAA 141032 Query 160828 GGATGCCATCTGTCGCAAGAGTAACCAGAAGAACTTTGG 160866 ||||| | ||||||||||| |||||| |||| Sbjct 141033 AGATGCATGCAACAAGAAGAGTAACCAAAAGAACCTTGG 141071 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1109474421307335