Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Monilinia_20aucupariae_20[genbank_20GCA_5F002162555.1_202017-05-31]
505 sequences; 54,948,206 total letters
Query= NC_015326.1
Length=346754
Score E
Sequences producing significant alignments: (Bits) Value
seq27 147 5e-30
seq17 138 3e-27
seq1 111 3e-19
seq8 86.0 1e-11
>seq27
Length=788475
Score = 147 bits (162), Expect = 5e-30
Identities = 155/204 (76%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996
||| || ||| ||| |||||||| |||||||||| ||| ||||| || || || | |||
Sbjct 516432 GTGCAGGGTGCTCTCCTTTTGAATGTTGTAATCGGAAAGGGTTCTGCCGTCCTCCAACTG 516373
Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056
||| ||||| ||||| | |||||||||||| || ||||| || || ||||| || || ||
Sbjct 516372 CTTTCCTGCAAAGATCAATCGTTGTTGGTCAGGTGGAATACCCTCCTTGTCCTGGATCTT 516313
Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116
||||||||| ||||| || || || ||| ||||| | |||| ||||| || ||
Sbjct 516312 CGACTTGACGTTATCAATAGTATCTGACGATTCTACTTCTAACGTAATTGTCTTACCAGT 516253
Query 195117 CAAAGTTTTTACGAACACTTGCAT 195140
||| || || || || | ||||||
Sbjct 516252 CAAGGTCTTGACAAAGATTTGCAT 516229
Score = 134 bits (148), Expect = 3e-26
Identities = 146/194 (75%), Gaps = 0/194 (0%)
Strand=Plus/Minus
Query 194923 AGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTC 194982
||||||| || | |||||| || ||||| || ||||||||||| |||| || || |
Sbjct 515990 AGTCTCAGGACCAAGTGAAGGGTCGACTCCTTCTGAATATTGTAGTCGGAGAGGGTACGA 515931
Query 194983 CCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCT 195042
||||| || || ||||| || ||||| || | || ||||| || || || || || ||
Sbjct 515930 CCATCCTCAAGTTGCTTTCCGGCGAAAATCAAACGCTGTTGATCGGGTGGGATACCCTCC 515871
Query 195043 TTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTA 195102
|| ||||| || ||| |||||| || || |||||||| ||| ||| |||||||||||
Sbjct 515870 TTATCTTGGATCTTTGACTTGACATTATCGATGGTGTCAGAAGATTCGACTTCAAGGGTG 515811
Query 195103 ACCGTCTTTCCTGT 195116
| |||||||| ||
Sbjct 515810 ATGGTCTTTCCGGT 515797
Score = 113 bits (124), Expect = 1e-19
Identities = 143/197 (73%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 194944 GTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACCT 195003
|| || || ||||| || ||||| || | | || | |||||||| |||||||||||
Sbjct 516197 GTAGATTCCTTTTGGATGTTGTAGTCTGACAACGTGCGGCCATCTTCAAGCTGCTTACCA 516138
Query 195004 GCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTG 195063
|| |||||||| || ||||| || || ||||| || || || |||||||| || |||
Sbjct 516137 GCAAAGATAAGACGCTGTTGATCAGGTGGAATACCCTCCTTATCTTGAATCTTAGATTTG 516078
Query 195064 ACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTT 195123
|| || || || || ||||| || || || | || | |||||||| ||||| ||
Sbjct 516077 ACATTGTCGATCGTATCCGATGACTCAACCTCCAAAGTGATGGTCTTTCCAGTCAAGGTC 516018
Query 195124 TTTACGAACACTTGCAT 195140
|| ||||| | ||||||
Sbjct 516017 TTAACGAAGATTTGCAT 516001
>seq17
Length=1064257
Score = 138 bits (152), Expect = 3e-27
Identities = 162/219 (74%), Gaps = 0/219 (0%)
Strand=Plus/Minus
Query 194922 GAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCT 194981
||| | ||| || | |||||| |||||||| ||||| || ||||| |||| |||||| |
Sbjct 789769 GAGACGCAACACCAAGTGAAGGGTGGACTCCTTTTGGATGTTGTAGTCGGAAAGAGTACG 789710
Query 194982 CCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTC 195041
||||| || || ||||| || |||||||| | ||| |||||||| || || || || ||
Sbjct 789709 GCCATCCTCAAGTTGCTTTCCAGCGAAGATCAATCGCTGTTGGTCGGGTGGGATTCCCTC 789650
Query 195042 TTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGT 195101
||||| || || || |||||| || || |||||||||||| || || || |||||
Sbjct 789649 CTTGTCCTGGATCTTGGACTTGACATTGTCGATGGTGTCCGAAGACTCAACCTCGAGGGT 789590
Query 195102 AACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
| || || || || | || || ||||| | |||||
Sbjct 789589 GATGGTTTTGCCCGTAAGGGTCTTGACGAAGATCTGCAT 789551
>seq1
Length=6243313
Score = 111 bits (122), Expect = 3e-19
Identities = 132/179 (74%), Gaps = 0/179 (0%)
Strand=Plus/Minus
Query 194953 TTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACCTGCGAAGATA 195012
||||| || |||||||| | ||||| | || || || || ||||| || ||||||||
Sbjct 2454774 TTTTGGATGTTGTAATCTGAGAGAGTACGTCCGTCCTCAAGTTGCTTTCCAGCGAAGATC 2454715
Query 195013 AGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCA 195072
| |||||||| || |||||||| || || ||||| || || || |||||| || |||
Sbjct 2454714 AAACGTTGTTGATCGGGAGGAATTCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCA 2454655
Query 195073 ATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAA 195131
|||||||| || || || |||||||| | ||||| || || | || || |||||
Sbjct 2454654 ATGGTGTCAGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTAAGGGTCTTGACGAA 2454596
>seq8
Length=1964072
Score = 86.0 bits (94), Expect = 1e-11
Identities = 188/279 (67%), Gaps = 2/279 (1%)
Strand=Plus/Plus
Query 160589 TTCTACGCCATCTGGACTTCCGATCTTTTCATGAAGAGAGTGAAAGACAATGGGGATTGG 160648
||||||||| | |||| | | ||||| || |||||| | || || | ||||| || |||
Sbjct 140794 TTCTACGCCTTGTGGATTCCTGATCTATTTATGAAGCGTGTTGAAAAGAATGGAGAGTGG 140853
Query 160649 AGCCTTTTCTGTCCCAATGAAGCGCCTGGACTTGATGATGTTTATGGTTCCGAGTTCGAG 160708
| ||| | || ||||| ||| || || | | ||||||||||| |||||||||
Sbjct 140854 ACTCTTATGTGCCCCAACGAATGTCCGGGTTTGGCAGATGTTTATGGCGAAGAGTTCGAG 140913
Query 160709 ACTCTTTATGAAAGATACGAAAAAG-AGGGAAGAGCCAAAAAGGTCGTGAAGGCCCAAGA 160767
|||| ||||| || ||||| || | || ||| | | ||| | ||||| ||| |
Sbjct 140914 GCTCTCTATGAGAGTTACGAGAAGGCTGGCAAGGGTC-GCAAGACTATCAAGGCTCAAAA 140972
Query 160768 ACTGTGGCATCACATCCTTGTCGCCCAAGTCGAGGTGGGTATGCCCTTTATCGCATACAA 160827
|| ||| | || || | |||||| |||| ||| | || || || |||||
Sbjct 140973 GCTTTGGTACTCTATTCTCGAGGCCCAAACCGAGACGGGAAATCCTTTCATGCTTTACAA 141032
Query 160828 GGATGCCATCTGTCGCAAGAGTAACCAGAAGAACTTTGG 160866
||||| | ||||||||||| |||||| ||||
Sbjct 141033 AGATGCATGCAACAAGAAGAGTAACCAAAAGAACCTTGG 141071
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1109474421307335
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |