Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Monilinia_20aucupariae_20[genbank_20GCA_5F002162555.1_202017-05-31]
505 sequences; 54,948,206 total letters
Query= NC_015398.1
Length=101487
Score E
Sequences producing significant alignments: (Bits) Value
seq17 105 4e-18
seq27 91.5 1e-13
>seq17
Length=1064257
Score = 105 bits (116), Expect = 4e-18
Identities = 156/217 (72%), Gaps = 8/217 (4%)
Strand=Plus/Minus
Query 34769 CAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATC 34828
||| |||||||||| ||| || || || ||||| ||||| ||||| | || ||||
Sbjct 789763 CAACACCAAGTGAAGGGTGGACTCCTTTTGGATGTTGTAGTCGGAAAGAGTACGGCCATC 789704
Query 34829 ATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34888
|| || || ||||| || || || | ||| || ||||| | || | |||||||||||
Sbjct 789703 CTCAAGTTGCTTTCCAGCGAAGATCAATCGCTGTTGGTCGGGTGGGATTCCCTCCTTGTC 789644
Query 34889 GCTAATCTTCTGTTTGACGGATGCTATCGAT--TCACCG--GCCTCAACATCGACGGTTA 34944
||||| ||||| || | ||||| | ||| | |||||| |||| ||| |
Sbjct 789643 CTGGATCTTGGACTTGAC--AT--TGTCGATGGTGTCCGAAGACTCAACCTCGAGGGTGA 789588
Query 34945 TGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981
||||||| ||||| || ||||| || |||||||||||
Sbjct 789587 TGGTTTTGCCCGTAAGGGTCTTGACGAAGATCTGCAT 789551
>seq27
Length=788475
Score = 91.5 bits (100), Expect = 1e-13
Identities = 146/210 (70%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832
|||||||| | ||||| || || |||||||| || || |||||| ||| | || |||
Sbjct 516437 ACCAAGTGCAGGGTGCTCTCCTTTTGAATGTTGTAATCGGAAAGGGTTCTGCCGTCCTCC 516378
Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892
| ||| ||||| ||||| || | |||||| ||||| | || | |||||||||||
Sbjct 516377 AACTGCTTTCCTGCAAAGATCAATCGTTGTTGGTCAGGTGGAATACCCTCCTTGTCCTGG 516318
Query 34893 ATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTT 34952
|||||| |||||| | || | || | || || || | || || || ||
Sbjct 516317 ATCTTCGACTTGACGTTATCAATAGTATCTGACGATTCTACTTCTAACGTAATTGTCTTA 516258
Query 34953 CCCGTGAGAGTCTTCACAAAGATCTGCATA 34982
|| || | ||||| |||||||| ||||||
Sbjct 516257 CCAGTCAAGGTCTTGACAAAGATTTGCATA 516228
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 324631601981640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |